Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC009229.3-201ENST00000608056 282 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 snoZ196.1-201ENST00000625269 89 ntBASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.22□□□□□ -2.21
HDHD3Q9BSH5 RNU6-222P-201ENST00000362438 107 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 snoU2-30.2-201ENST00000362805 70 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 RNU4-13P-201ENST00000364019 141 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 Y_RNA.474-201ENST00000384341 102 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 MIR934-201ENST00000401241 83 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 AL161935.2-201ENST00000414627 60 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 RPL21P111-201ENST00000418453 477 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 NCOR1P3-201ENST00000420479 303 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 RNU1-98P-201ENST00000458992 160 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 RPL7P42-201ENST00000481005 679 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 HMGN1P12-201ENST00000499125 195 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 RNU6-1114P-201ENST00000516022 107 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 RNU7-128P-201ENST00000517247 62 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 AC010615.1-201ENST00000594254 1764 ntBASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HDHD3Q9BSH5 MIR302D-201ENST00000362275 68 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 MIR126-201ENST00000362291 85 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 Y_RNA.106-201ENST00000363189 100 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 U3.8-201ENST00000363675 217 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 RNU1-96P-201ENST00000364163 162 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 RNU6-338P-201ENST00000383888 105 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 RNU6-601P-201ENST00000384540 107 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 RNU6-331P-201ENST00000384724 107 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 MIR517C-201ENST00000385103 95 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 MIR320B2-201ENST00000408479 138 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 RNU6-57P-201ENST00000411348 103 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 RPL37P10-201ENST00000412884 288 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 RPS27P1-201ENST00000450552 247 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 AC107399.1-201ENST00000451226 265 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 U8.22-201ENST00000459141 133 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 SNORA59A-201ENST00000459326 152 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 RNA5SP57-201ENST00000459463 123 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 AC114982.1-201ENST00000469402 321 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 RPL26P26-201ENST00000480251 434 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 AC027575.1-201ENST00000481064 460 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 RPL23AP94-201ENST00000512518 302 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 Y_RNA.708-201ENST00000516950 96 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 FRG2DP-202ENST00000566967 323 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 AC069114.2-201ENST00000604699 304 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 AL078596.1-201ENST00000624856 447 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 AC099654.14-201ENST00000638599 341 ntBASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
HDHD3Q9BSH5 MIR424-201ENST00000362227 98 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 RNU6-280P-201ENST00000364145 104 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 RNA5SP190-201ENST00000365222 118 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 RNU6-793P-201ENST00000384233 104 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 RNU6-1145P-201ENST00000384246 107 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 MIR194-1-201ENST00000384892 85 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 MIR329-1-201ENST00000385028 80 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 SNORA67.6-201ENST00000391093 99 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 MIR190B-201ENST00000401119 79 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 SNORD13-201ENST00000459299 104 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 MTND4P17-201ENST00000470444 350 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 RNU6-970P-201ENST00000516312 107 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 RNU1-117P-201ENST00000517041 158 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 AL121579.1-201ENST00000555129 305 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 SNORD53B-201ENST00000577887 78 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 MIR3683-201ENST00000580847 82 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 AL645939.4-201ENST00000604495 135 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 AC100812.1-201ENST00000607622 580 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 AL359757.2-201ENST00000624309 274 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 AC095038.3-201ENST00000634439 195 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HDHD3Q9BSH5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
HDHD3Q9BSH5 MTND5P16-201ENST00000460269 1703 ntBASIC1.18□□□□□ -2.22
HDHD3Q9BSH5 WWP1P1-201ENST00000466609 2769 ntBASIC1.18□□□□□ -2.22
HDHD3Q9BSH5 RNY1P16-201ENST00000363063 111 ntBASIC1.18□□□□□ -2.22
HDHD3Q9BSH5 MIR520A-201ENST00000384862 85 ntBASIC1.18□□□□□ -2.22
HDHD3Q9BSH5 RNU6-360P-201ENST00000390944 104 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms