Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
NPAS1Q99742 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.29□□□□□ -2.04
NPAS1Q99742 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.29□□□□□ -2.04
NPAS1Q99742 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.29□□□□□ -2.04
NPAS1Q99742 MIR3162-201ENST00000581818 82 ntBASIC2.29□□□□□ -2.04
NPAS1Q99742 AC116312.1-201ENST00000606841 314 ntBASIC2.29□□□□□ -2.04
NPAS1Q99742 AC008873.1-201ENST00000625051 138 ntBASIC2.29□□□□□ -2.04
NPAS1Q99742 SCARNA15.3-201ENST00000626315 122 ntBASIC2.29□□□□□ -2.04
NPAS1Q99742 SCARNA4.1-201ENST00000628597 123 ntBASIC2.29□□□□□ -2.04
NPAS1Q99742 MIR3674-201ENST00000636576 68 ntBASIC2.29□□□□□ -2.04
NPAS1Q99742 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NPAS1Q99742 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NPAS1Q99742 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
NPAS1Q99742 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NPAS1Q99742 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
NPAS1Q99742 RNU6-1266P-201ENST00000362794 105 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 Y_RNA.99-201ENST00000363138 105 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 Y_RNA.111-201ENST00000363248 100 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 RNU6-238P-201ENST00000363313 106 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 Y_RNA.332-201ENST00000365271 113 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 MIR1262-201ENST00000408276 93 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 ELOCP21-201ENST00000412558 336 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.28□□□□□ -2.04
NPAS1Q99742 MTND5P22-201ENST00000458380 195 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 AC067942.3-201ENST00000512025 362 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 RNU6-897P-201ENST00000517135 105 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
NPAS1Q99742 AC008269.2-201ENST00000561915 1105 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 RAC1P9-201ENST00000604990 392 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 AC010205.1-201ENST00000616668 449 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 snoZ196.1-201ENST00000625269 89 ntBASIC2.28□□□□□ -2.04
NPAS1Q99742 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
NPAS1Q99742 AC007336.1-201ENST00000576365 3828 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NPAS1Q99742 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NPAS1Q99742 RNU6-160P-201ENST00000384591 107 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 TOMM22P2-201ENST00000430735 237 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 HMGB3P3-201ENST00000510526 400 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 RNU6-1046P-201ENST00000516538 107 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 RNU6-635P-201ENST00000516651 102 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 RNU7-110P-201ENST00000516891 62 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 AL109918.3-201ENST00000603072 338 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 AC136443.5-201ENST00000603741 370 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 AL021879.1-201ENST00000611756 288 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.27□□□□□ -2.05
NPAS1Q99742 AC004467.1-201ENST00000615678 330 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 AC006001.4-201ENST00000622243 395 ntBASIC2.27□□□□□ -2.05
NPAS1Q99742 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.27□□□□□ -2.05
NPAS1Q99742 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.26□□□□□ -2.05
NPAS1Q99742 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NPAS1Q99742 Y_RNA.153-201ENST00000363615 91 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 Y_RNA.183-201ENST00000363882 113 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 RNU6-937P-201ENST00000384325 106 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 RNU6-21P-201ENST00000384710 107 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 MIR27B-201ENST00000385129 97 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 MIR524-201ENST00000385242 87 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 MIR1253-201ENST00000408273 105 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 RNU5A-5P-201ENST00000411054 116 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 NDUFB4P10-201ENST00000452541 359 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 AC010531.2-201ENST00000465012 153 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.26□□□□□ -2.05
NPAS1Q99742 AC006380.1-201ENST00000603598 186 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 SNORD14A-201ENST00000606526 91 ntBASIC2.26□□□□□ -2.05
NPAS1Q99742 Y_RNA.19-201ENST00000362462 99 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 RNU6-770P-201ENST00000363929 105 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 RNU6-713P-201ENST00000384761 107 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 IPO7P1-201ENST00000442031 636 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 AC011753.1-201ENST00000451001 220 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 SNORA59A-201ENST00000459326 152 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 UBE2DNL-203ENST00000474922 222 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 RNU2-34P-201ENST00000516534 121 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 AP005660.1-201ENST00000522972 293 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 AK6P2-201ENST00000549020 471 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 AC011373.1-201ENST00000607270 237 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 MIR6895-201ENST00000613497 78 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 MIR376A1-201ENST00000616574 68 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.25□□□□□ -2.05
NPAS1Q99742 AL159152.1-201ENST00000635019 2587 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 LINC02555-201ENST00000563933 1951 ntBASIC2.25□□□□□ -2.05
NPAS1Q99742 RNU6-23P-201ENST00000363283 107 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 RNU1-52P-201ENST00000384190 164 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 RNU6-1235P-201ENST00000384559 107 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 MIR29C-201ENST00000385231 88 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 MIR1185-2-201ENST00000408687 86 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 RN7SKP284-201ENST00000411002 343 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 RNU6-130P-201ENST00000411112 103 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 AC005002.2-201ENST00000438228 269 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 AC073910.1-201ENST00000445047 438 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 RNU6-498P-201ENST00000459468 107 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 AC010655.3-201ENST00000478818 450 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 RPL26P26-201ENST00000480251 434 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.24□□□□□ -2.05
NPAS1Q99742 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NPAS1Q99742 RNU6-1143P-201ENST00000516125 104 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.24□□□□□ -2.05
NPAS1Q99742 AC027419.1-201ENST00000522976 328 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms