Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 MIR4300-201ENST00000581016 96 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 AC122133.1-201ENST00000613964 233 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 AC027807.2-201ENST00000616099 408 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 SEPT14P17-201ENST00000617978 177 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 MTND5P17-201ENST00000418405 1603 ntBASIC0.05□□□□□ -2.4
LYSMD1Q96S90 RNU6-501P-201ENST00000364072 100 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 RNU6-169P-201ENST00000365336 107 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.04□□□□□ -2.4
LYSMD1Q96S90 RNU6-1029P-201ENST00000384109 107 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 RNU6-434P-201ENST00000384376 107 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 RNU6-83P-201ENST00000384568 112 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 SNORD105-201ENST00000386910 85 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 MRPS18CP6-201ENST00000423587 223 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 AL365184.2-201ENST00000431139 435 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 USP9YP29-201ENST00000445112 563 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.04□□□□□ -2.4
LYSMD1Q96S90 RNU7-94P-201ENST00000459576 63 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.04□□□□□ -2.4
LYSMD1Q96S90 AC004223.2-201ENST00000590309 544 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 RNU6-85P-201ENST00000605989 107 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 U6.73-201ENST00000619194 103 ntBASIC0.04□□□□□ -2.4
LYSMD1Q96S90 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
LYSMD1Q96S90 AC005592.1-201ENST00000566527 1640 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 Y_RNA.205-201ENST00000364128 113 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 Y_RNA.466-201ENST00000384294 113 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 MIR526A1-201ENST00000384897 85 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 RNU4-46P-201ENST00000410818 138 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 MTCYBP10-201ENST00000424905 650 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 MTND3P9-201ENST00000429526 346 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 AC004854.1-201ENST00000440356 349 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 MTCO1P19-201ENST00000443487 500 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.03□□□□□ -2.4
LYSMD1Q96S90 CYCTP-201ENST00000504253 315 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 RNU2-56P-201ENST00000516826 190 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 RNU6-612P-201ENST00000516909 102 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 RNU6-410P-201ENST00000517006 107 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 RNA5SP330-201ENST00000517096 96 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 RNU6-58P-201ENST00000517143 103 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 AGGF1P4-201ENST00000568249 801 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 AP000811.1-201ENST00000603803 651 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 SNRPGP20-201ENST00000604477 205 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 AC138749.5-201ENST00000611461 208 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 RMST_3.1-201ENST00000611651 109 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 uc_338.34-201ENST00000617467 174 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 AC009878.1-201ENST00000621819 340 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 AC008873.1-201ENST00000625051 138 ntBASIC0.03□□□□□ -2.4
LYSMD1Q96S90 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.02□□□□□ -2.41
LYSMD1Q96S90 ZNF204P-201ENST00000416749 2397 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
LYSMD1Q96S90 RNU6-1266P-201ENST00000362794 105 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 SNORD44.1-201ENST00000363202 61 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 RNA5SP62-201ENST00000363457 110 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 RNU4-45P-201ENST00000365469 141 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 SNORD73A-201ENST00000386062 65 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.02□□□□□ -2.41
LYSMD1Q96S90 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.02□□□□□ -2.41
LYSMD1Q96S90 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.02□□□□□ -2.41
LYSMD1Q96S90 USP9YP12-201ENST00000450481 570 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 MTCO2P18-201ENST00000457151 658 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.02□□□□□ -2.41
LYSMD1Q96S90 RNU4-77P-201ENST00000516692 156 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 AC069113.1-201ENST00000517763 267 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.02□□□□□ -2.41
LYSMD1Q96S90 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 FRG2DP-202ENST00000566967 323 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.02□□□□□ -2.41
LYSMD1Q96S90 MIR4438-201ENST00000585271 93 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 AC018714.1-201ENST00000605028 208 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 AL162730.1-201ENST00000605734 292 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 RNU4-5P-201ENST00000607255 135 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 SCARNA4-201ENST00000629045 128 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 AC099654.13-201ENST00000639774 207 ntBASIC0.02□□□□□ -2.41
LYSMD1Q96S90 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
LYSMD1Q96S90 RNU5B-2P-201ENST00000363036 113 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 SNORA67.2-201ENST00000384300 149 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 MIR487A-201ENST00000385009 80 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 RNA5SP219-201ENST00000390940 113 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 MIR1185-1-201ENST00000408598 86 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 AC005534.2-201ENST00000431047 433 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.01□□□□□ -2.41
LYSMD1Q96S90 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.01□□□□□ -2.41
LYSMD1Q96S90 RNU7-182P-201ENST00000459009 62 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.01□□□□□ -2.41
LYSMD1Q96S90 AC090572.1-201ENST00000519251 160 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 AF235103.2-201ENST00000525753 346 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 MRPS36P4-201ENST00000534436 298 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 AC023157.2-201ENST00000540596 141 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 MIR4775-201ENST00000581168 75 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.01□□□□□ -2.41
LYSMD1Q96S90 AC068790.2-201ENST00000602601 557 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 7SK.7-201ENST00000603504 247 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 AC025449.1-201ENST00000603896 529 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 MIR6779-201ENST00000617283 64 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.01□□□□□ -2.41
LYSMD1Q96S90 SEPT14P19-203ENST00000633205 211 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 MIR6079-201ENST00000635807 62 ntBASIC0.01□□□□□ -2.41
LYSMD1Q96S90 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
LYSMD1Q96S90 Y_RNA.267-201ENST00000364679 109 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 SNORD87-201ENST00000364849 89 ntBASIC0□□□□□ -2.41
LYSMD1Q96S90 RNU5E-5P-201ENST00000365379 116 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms