Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RNU6-348P-201ENST00000384386 107 ntBASIC0.81□□□□□ -2.28
C9orf72Q96LT7 RNU6-505P-201ENST00000384427 107 ntBASIC0.81□□□□□ -2.28
C9orf72Q96LT7 RNY3P9-201ENST00000384727 106 ntBASIC0.81□□□□□ -2.28
C9orf72Q96LT7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
C9orf72Q96LT7 MRPL42P3-201ENST00000401492 326 ntBASIC0.81□□□□□ -2.28
C9orf72Q96LT7 AL034345.1-201ENST00000407768 123 ntBASIC0.81□□□□□ -2.28
C9orf72Q96LT7 AL663109.1-201ENST00000411498 844 ntBASIC0.81□□□□□ -2.28
C9orf72Q96LT7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.81□□□□□ -2.28
C9orf72Q96LT7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.81□□□□□ -2.28
C9orf72Q96LT7 MRPS10P2-201ENST00000431226 381 ntBASIC0.81□□□□□ -2.28
C9orf72Q96LT7 AL606489.2-201ENST00000433886 234 ntBASIC0.81□□□□□ -2.28
C9orf72Q96LT7 AC092436.3-201ENST00000511788 257 ntBASIC0.81□□□□□ -2.28
C9orf72Q96LT7 MIR8076-201ENST00000611401 83 ntBASIC0.81□□□□□ -2.28
C9orf72Q96LT7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
C9orf72Q96LT7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
C9orf72Q96LT7 RNU6-82P-201ENST00000363970 107 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 Y_RNA.378-201ENST00000365652 113 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 MIR19B1-201ENST00000384829 87 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AL353193.1-201ENST00000421444 268 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AC063976.4-201ENST00000421971 163 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.8□□□□□ -2.28
C9orf72Q96LT7 MTCO2P19-201ENST00000427513 598 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AL359672.1-201ENST00000442302 409 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.8□□□□□ -2.28
C9orf72Q96LT7 SRRM1P2-201ENST00000464531 1192 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.8□□□□□ -2.28
C9orf72Q96LT7 RPL23AP75-201ENST00000491601 451 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AC105758.1-201ENST00000506038 399 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 RNA5SP401-201ENST00000515920 127 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 RNA5SP454-201ENST00000517231 127 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AL118558.2-201ENST00000556294 238 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AC007684.1-201ENST00000609671 477 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.8□□□□□ -2.28
C9orf72Q96LT7 AL513423.1-201ENST00000621695 132 ntBASIC0.8□□□□□ -2.28
C9orf72Q96LT7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
C9orf72Q96LT7 RNY1-201ENST00000364228 113 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 RNU4-76P-201ENST00000364509 141 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 RNU4-66P-201ENST00000365199 138 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 RNU6-214P-201ENST00000384130 107 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 RNU6-933P-201ENST00000384424 107 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
C9orf72Q96LT7 SNORD124-201ENST00000459577 104 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 BET1P1-201ENST00000482276 359 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 SNORA19.2-201ENST00000516013 114 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 RNU6-947P-201ENST00000516264 106 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 RNA5SP168-201ENST00000516642 112 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 RN7SKP49-201ENST00000516675 260 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 MTATP6P24-201ENST00000576835 677 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 MIR4778-201ENST00000577635 80 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 SNORD11B-201ENST00000607707 90 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 AC073349.3-201ENST00000617616 186 ntBASIC0.79□□□□□ -2.28
C9orf72Q96LT7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.78□□□□□ -2.28
C9orf72Q96LT7 RNU6-1103P-201ENST00000384150 107 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 RNU6-784P-201ENST00000384330 106 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 SNORA12.1-201ENST00000390873 148 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 RNA5SP504-201ENST00000410676 117 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.78□□□□□ -2.28
C9orf72Q96LT7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.78□□□□□ -2.28
C9orf72Q96LT7 AC004941.2-201ENST00000427009 228 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 AC002429.1-201ENST00000437672 148 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 USP9YP29-201ENST00000445112 563 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 MTCO1P29-201ENST00000496868 288 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.78□□□□□ -2.28
C9orf72Q96LT7 MTND1P5-201ENST00000517906 940 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.78□□□□□ -2.28
C9orf72Q96LT7 AC004584.2-201ENST00000570407 410 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 MIR5000-201ENST00000577717 103 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 CPDP1-201ENST00000579660 283 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 GHRLOS.1-201ENST00000610995 70 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 AC106800.4-201ENST00000614905 153 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 MIR6515-201ENST00000619843 57 ntBASIC0.78□□□□□ -2.28
C9orf72Q96LT7 Y_RNA.124-201ENST00000363339 93 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 SNORD114-24-201ENST00000365029 72 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 MIR660-201ENST00000385235 97 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
C9orf72Q96LT7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.77□□□□□ -2.29
C9orf72Q96LT7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.77□□□□□ -2.29
C9orf72Q96LT7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.77□□□□□ -2.29
C9orf72Q96LT7 AC245047.7-201ENST00000440265 293 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 RNU7-99P-201ENST00000516271 62 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 RNA5SP54-201ENST00000516951 92 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 RNU7-128P-201ENST00000517247 62 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 AC073648.5-201ENST00000603502 305 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 AC073114.1-201ENST00000612027 490 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 AL391262.2-201ENST00000622466 494 ntBASIC0.77□□□□□ -2.29
C9orf72Q96LT7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
C9orf72Q96LT7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
C9orf72Q96LT7 AP000568.1-201ENST00000282964 442 ntBASIC0.76□□□□□ -2.29
C9orf72Q96LT7 SNORD87-201ENST00000364849 89 ntBASIC0.76□□□□□ -2.29
C9orf72Q96LT7 RNU6-38P-201ENST00000384085 107 ntBASIC0.76□□□□□ -2.29
C9orf72Q96LT7 SNORD12-201ENST00000391002 90 ntBASIC0.76□□□□□ -2.29
C9orf72Q96LT7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
C9orf72Q96LT7 RNU2-64P-201ENST00000411315 191 ntBASIC0.76□□□□□ -2.29
C9orf72Q96LT7 AC114482.1-201ENST00000418010 247 ntBASIC0.76□□□□□ -2.29
C9orf72Q96LT7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.76□□□□□ -2.29
C9orf72Q96LT7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms