Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM47Q96LD4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM47Q96LD4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM47Q96LD4 RNU1-75P-201ENST00000347264 129 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 U3.8-201ENST00000363675 217 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 Y_RNA.265-201ENST00000364677 108 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 HMGN2P8-201ENST00000391458 268 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 EI24P2-201ENST00000397776 1076 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM47Q96LD4 MIR1290-201ENST00000408735 78 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 AC099548.1-201ENST00000421443 426 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 RPL23AP82-202ENST00000427528 469 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 AL590383.1-201ENST00000428602 75 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 RPL23AP7-203ENST00000449021 469 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 AP000873.1-201ENST00000463987 400 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 CENPBD1P1-201ENST00000464061 469 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM47Q96LD4 AC005921.1-201ENST00000510589 286 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 RNU6-830P-201ENST00000516353 107 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
TRIM47Q96LD4 AC027176.1-201ENST00000560204 514 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 MIR3923-201ENST00000579521 83 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 SNORA62.6-201ENST00000606322 83 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 TCL6_2.1-201ENST00000615162 119 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 AC118273.1-201ENST00000525324 3006 ntBASIC4.27□□□□□ -1.73
TRIM47Q96LD4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM47Q96LD4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM47Q96LD4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM47Q96LD4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM47Q96LD4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM47Q96LD4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
TRIM47Q96LD4 Y_RNA.213-201ENST00000364178 111 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 RNU6-140P-201ENST00000384566 108 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 SNORA26-201ENST00000391286 122 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 AL117342.1-201ENST00000404861 406 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM47Q96LD4 NDUFB4P6-201ENST00000436819 366 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 RBMY2UP-201ENST00000453474 324 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM47Q96LD4 TRBV12-2-201ENST00000489763 344 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 SCARNA23-201ENST00000516060 130 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM47Q96LD4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM47Q96LD4 MIR5006-201ENST00000583027 110 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 MIR3136-201ENST00000583498 78 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 AC005972.2-201ENST00000604690 348 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 AL137849.1-201ENST00000604767 169 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 uc_338.4-201ENST00000616635 176 ntBASIC4.26□□□□□ -1.73
TRIM47Q96LD4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM47Q96LD4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM47Q96LD4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TRIM47Q96LD4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM47Q96LD4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM47Q96LD4 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 SNORD114-7-201ENST00000362520 77 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 RNU1-18P-201ENST00000363062 164 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 RNU6-675P-201ENST00000384236 104 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 MIR3074-201ENST00000384885 81 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 AC017083.1-201ENST00000428093 483 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 AC012308.1-201ENST00000451232 178 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 RNA5SP57-201ENST00000459463 123 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 RPL23AP67-201ENST00000465341 474 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 SRIP1-201ENST00000489235 288 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM47Q96LD4 AC009163.5-201ENST00000575421 637 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 AC090897.2-201ENST00000581715 130 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 MIR7851-201ENST00000610611 160 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
TRIM47Q96LD4 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 U2.21-201ENST00000637295 81 ntBASIC4.25□□□□□ -1.73
TRIM47Q96LD4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TRIM47Q96LD4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TRIM47Q96LD4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM47Q96LD4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRIM47Q96LD4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM47Q96LD4 AC103988.1-201ENST00000566382 2177 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM47Q96LD4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM47Q96LD4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM47Q96LD4 RNY3P2-201ENST00000362918 102 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 RNU6-487P-201ENST00000365430 104 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 MIR873-201ENST00000401120 77 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 EIF4EP4-201ENST00000424916 578 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 HMGN2P21-201ENST00000447764 270 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 RNU7-171P-201ENST00000459581 62 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 RN7SL93P-201ENST00000463035 293 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM47Q96LD4 RPL36AP21-201ENST00000490372 323 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 RAC1P2-201ENST00000511164 579 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 RNA5SP208-201ENST00000516156 78 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM47Q96LD4 DEFB131E-201ENST00000532329 154 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 MIR3129-201ENST00000581095 76 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 AC012493.2-201ENST00000595083 291 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 AC093732.2-201ENST00000607950 274 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 FAM35DP-201ENST00000323387 2712 ntBASIC4.24□□□□□ -1.73
TRIM47Q96LD4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM47Q96LD4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms