Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 MIR378A-201ENST00000362177 66 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 RNU6-950P-201ENST00000384651 107 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 RNU6-1068P-201ENST00000410958 103 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 AL606490.4-201ENST00000423117 127 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 MTATP6P17-201ENST00000431030 672 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 AL353572.1-201ENST00000442490 417 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 RPS27P1-201ENST00000450552 247 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 RNU7-95P-201ENST00000459222 64 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 PSMC1P5-201ENST00000512850 177 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 ACA64.5-201ENST00000516207 127 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 RNU1-142P-201ENST00000516682 145 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 RNU1-117P-201ENST00000517041 158 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 TPRKBP2-201ENST00000565969 475 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 AC010620.1-201ENST00000601088 1102 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 AL929325.1-201ENST00000603096 117 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 SNORD11B-201ENST00000607707 90 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 Z99129.1-201ENST00000612510 255 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 U6.108-201ENST00000637764 58 ntBASIC1.03□□□□□ -2.24
PKNOX2Q96KN3 RNA5SP259-201ENST00000365541 109 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 MIR100-201ENST00000385259 80 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 NDUFA5P4-201ENST00000436704 385 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 SEPT14P3-201ENST00000439401 183 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 AL732372.2-207ENST00000445840 183 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 AC098826.2-201ENST00000452011 651 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 SEPT14P2-201ENST00000453405 183 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 SEPT14P4-201ENST00000513445 186 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 RNU6-1198P-201ENST00000516904 67 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 FO082796.1-201ENST00000523795 183 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 AL512360.1-201ENST00000555346 234 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 MIR3664-201ENST00000579074 99 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 AC021506.2-201ENST00000612354 169 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 AL359075.3-201ENST00000613288 217 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 AL157834.3-201ENST00000615543 103 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 AL353770.2-201ENST00000620024 78 ntBASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
PKNOX2Q96KN3 RNA5SP432-201ENST00000362480 116 ntBASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 SNORD115-32-201ENST00000364079 82 ntBASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 RNU4-9P-201ENST00000364951 139 ntBASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 RNU6-790P-201ENST00000384479 105 ntBASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 AL590002.1-201ENST00000406554 418 ntBASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 AL606517.2-201ENST00000442855 241 ntBASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 AC107401.1-201ENST00000503426 685 ntBASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 AC103851.1-201ENST00000506833 274 ntBASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 AP000942.3-201ENST00000603702 160 ntBASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
PKNOX2Q96KN3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
PKNOX2Q96KN3 Y_RNA.151-201ENST00000363566 112 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 Y_RNA.372-201ENST00000365599 102 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 RNU6-1031P-201ENST00000384773 107 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 MIR32-201ENST00000384965 70 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1□□□□□ -2.25
PKNOX2Q96KN3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1□□□□□ -2.25
PKNOX2Q96KN3 NDUFB4P10-201ENST00000452541 359 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 PCMTD1P1-201ENST00000455560 355 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1□□□□□ -2.25
PKNOX2Q96KN3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1□□□□□ -2.25
PKNOX2Q96KN3 MTCO2P30-201ENST00000503662 364 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 AC019235.1-201ENST00000503847 207 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 SNORA31.10-201ENST00000516482 106 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 RNU6-58P-201ENST00000517143 103 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1□□□□□ -2.25
PKNOX2Q96KN3 AC010525.2-201ENST00000590920 195 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 AC022217.4-201ENST00000604389 163 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 DISC2.1-201ENST00000612827 205 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 AC006504.8-201ENST00000621046 635 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 AC022079.1-201ENST00000621546 602 ntBASIC1□□□□□ -2.25
PKNOX2Q96KN3 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 SNORD114-24-201ENST00000365029 72 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 Y_RNA.373-201ENST00000365600 103 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 FGF7P8-201ENST00000402994 292 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 AC010154.1-201ENST00000425857 269 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 Z82188.1-201ENST00000436709 154 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 Y_RNA.665-201ENST00000516177 98 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 SUMO2P16-201ENST00000519475 264 ntBASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.99□□□□□ -2.25
PKNOX2Q96KN3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms