Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL355596.1-201ENST00000565399 3996 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 Y_RNA.8-201ENST00000362353 102 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 SNORA9.2-201ENST00000365361 133 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 Y_RNA.498-201ENST00000384460 102 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 RNU5E-9P-201ENST00000411164 104 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 RPS15AP5-201ENST00000436276 388 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.34□□□□□ -1.87
DDX11Q96FC9 RPL39P40-201ENST00000445481 146 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 AC012308.1-201ENST00000451232 178 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 AL121594.1-201ENST00000475906 575 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 AC103975.1-201ENST00000482506 483 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 CYP4A27P-201ENST00000567218 190 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 MIR4319-201ENST00000577285 85 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 MIR3162-201ENST00000581818 82 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 AP001485.1-201ENST00000604799 199 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 UCA1.1-201ENST00000620952 75 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.34□□□□□ -1.87
DDX11Q96FC9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
DDX11Q96FC9 AC002543.1-201ENST00000299783 1954 ntBASIC3.34□□□□□ -1.88
DDX11Q96FC9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.34□□□□□ -1.88
DDX11Q96FC9 AC092593.1-201ENST00000515413 1815 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
DDX11Q96FC9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
DDX11Q96FC9 RNU4-56P-201ENST00000364700 142 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 MIR512-1-201ENST00000384913 84 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 Y_RNA.580-201ENST00000391004 95 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 AL512633.1-201ENST00000399931 655 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 AL357139.1-201ENST00000407792 426 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 RNU2-54P-201ENST00000410299 190 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 AC024067.1-201ENST00000426199 223 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX11Q96FC9 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 RPL23AP58-201ENST00000440453 469 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX11Q96FC9 AIG1P1-201ENST00000503376 148 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 DEFB131C-201ENST00000528817 165 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX11Q96FC9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX11Q96FC9 MIR3136-201ENST00000583498 78 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 AL008718.3-201ENST00000610217 321 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.33□□□□□ -1.88
DDX11Q96FC9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX11Q96FC9 AL136360.1-201ENST00000503377 1900 ntBASIC3.32□□□□□ -1.88
DDX11Q96FC9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DDX11Q96FC9 AC096644.4-201ENST00000563417 2912 ntBASIC3.32□□□□□ -1.88
DDX11Q96FC9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
DDX11Q96FC9 RNU1-62P-201ENST00000362599 164 ntBASIC3.32□□□□□ -1.88
DDX11Q96FC9 SNORD21-201ENST00000383953 95 ntBASIC3.32□□□□□ -1.88
DDX11Q96FC9 RNU6-1310P-201ENST00000384153 107 ntBASIC3.32□□□□□ -1.88
DDX11Q96FC9 MIR208B-201ENST00000401172 77 ntBASIC3.32□□□□□ -1.88
DDX11Q96FC9 CBX3P9-201ENST00000402326 552 ntBASIC3.32□□□□□ -1.88
DDX11Q96FC9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX11Q96FC9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX11Q96FC9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX11Q96FC9 DEFB117-201ENST00000602356 141 ntBASIC3.32□□□□□ -1.88
DDX11Q96FC9 AC090115.4-201ENST00000609970 188 ntBASIC3.32□□□□□ -1.88
DDX11Q96FC9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX11Q96FC9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX11Q96FC9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
DDX11Q96FC9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX11Q96FC9 RNU6-1272P-201ENST00000362776 107 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 Y_RNA.415-201ENST00000384012 112 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 AC009963.1-201ENST00000417265 157 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 AIMP1P2-201ENST00000425294 312 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 PTGES3P4-201ENST00000426243 356 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 AC009414.1-201ENST00000427200 443 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 AC104332.2-201ENST00000429959 156 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 RPL23AP70-201ENST00000483361 460 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 HMGB3P3-201ENST00000510526 400 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 RNU6-155P-201ENST00000516347 100 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 SUMO2P18-201ENST00000518873 252 ntBASIC3.31□□□□□ -1.88
DDX11Q96FC9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX11Q96FC9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX11Q96FC9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX11Q96FC9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX11Q96FC9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX11Q96FC9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX11Q96FC9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX11Q96FC9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX11Q96FC9 RNU6-454P-201ENST00000364292 107 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 Y_RNA.272-201ENST00000364696 102 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 RNU6-1081P-201ENST00000384537 107 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 Y_RNA.571-201ENST00000384753 98 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 AL590004.2-201ENST00000404787 371 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 RNA5SP201-201ENST00000410316 124 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 AC063976.3-201ENST00000426849 329 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX11Q96FC9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX11Q96FC9 AC003982.1-202ENST00000469928 248 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 RPS27AP9-201ENST00000477681 438 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 SEM1P1-201ENST00000506694 209 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 RNU6-56P-201ENST00000516986 93 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX11Q96FC9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX11Q96FC9 RPS15AP11-201ENST00000594193 385 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 AL034555.1-201ENST00000604816 211 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 MIR3674-201ENST00000636576 68 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 AC068700.1-201ENST00000565862 3754 ntBASIC3.3□□□□□ -1.88
DDX11Q96FC9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX11Q96FC9 AC004944.1-201ENST00000517807 3059 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms