Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-326P-201ENST00000365480 107 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.562-201ENST00000384695 113 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 AL357139.1-201ENST00000407792 426 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 MIR1283-1-201ENST00000408494 87 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 RNA5SP504-201ENST00000410676 117 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 RNA5SP184-201ENST00000411071 108 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 RNU6-847P-201ENST00000411115 108 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 AC003685.2-201ENST00000422795 395 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 POLR2KP2-201ENST00000438155 177 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 AC108938.1-201ENST00000451204 136 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 RNA5SP282-201ENST00000516355 108 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 RNU2-31P-201ENST00000516954 155 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 SCARNA24.2-201ENST00000516968 130 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 AC012433.1-201ENST00000588916 398 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 RPL12P50-201ENST00000603116 116 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 AC006023.1-201ENST00000603944 259 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.16-201ENST00000362421 102 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.286-201ENST00000364813 102 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.446-201ENST00000384178 104 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 RNU6-102P-201ENST00000384485 104 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 MIR548B-201ENST00000385247 97 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 RNU2-54P-201ENST00000410299 190 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 AC139712.2-201ENST00000424302 339 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 AC063976.3-201ENST00000426849 329 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 HMGB3P17-201ENST00000504195 649 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 RNU6-155P-201ENST00000516347 100 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 AC090616.3-201ENST00000582184 217 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 MIR4635-201ENST00000583759 79 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 AL109918.3-201ENST00000603072 338 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 AL590240.4-201ENST00000616908 390 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 IGHVIII-44-202ENST00000636235 289 ntBASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTHRC1Q96CG8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.101-201ENST00000363154 102 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 RNU6-379P-201ENST00000363813 104 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.383-201ENST00000383855 97 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 AC009963.1-201ENST00000417265 157 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 HMGN2P18-201ENST00000450680 270 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 AL109933.2-201ENST00000452651 260 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 RNU7-57P-201ENST00000459540 60 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 HMGN2P9-201ENST00000476875 229 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 SERF1AP1-201ENST00000514575 187 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 RNU6-1023P-201ENST00000516137 106 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 RNU6-826P-201ENST00000516827 104 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 RNA5SP490-201ENST00000517141 136 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 AC055872.1-201ENST00000570978 278 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 MIR3128-201ENST00000581957 66 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 AC127459.3-201ENST00000624328 466 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 MIR1248-201ENST00000629190 106 ntBASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.46□□□□□ -2.02
CTHRC1Q96CG8 AL365361.1-201ENST00000566942 3481 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 RNU1-23P-201ENST00000363361 144 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.352-201ENST00000365439 102 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 RNU6-514P-201ENST00000384208 107 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.477-201ENST00000384352 108 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 SNORD109B-201ENST00000458961 67 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 SNORD109A-201ENST00000459128 67 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 UBE2DNL-203ENST00000474922 222 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 ATP5EP1-201ENST00000510257 156 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 RNU6-948P-201ENST00000516374 107 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 RN7SKP40-201ENST00000517211 242 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 MIR3684-201ENST00000579779 74 ntBASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CTHRC1Q96CG8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 SNORA25.1-201ENST00000362326 128 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 RNU6-859P-201ENST00000362728 107 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 RNU6-743P-201ENST00000364151 106 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.416-201ENST00000384014 113 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.500-201ENST00000384466 111 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 Y_RNA.552-201ENST00000384665 112 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 MIR592-201ENST00000384959 97 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 MIR1185-2-201ENST00000408687 86 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 RNU2-52P-201ENST00000410680 190 ntBASIC2.44□□□□□ -2.02
CTHRC1Q96CG8 AC024067.1-201ENST00000426199 223 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 242 ms