Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNA5SP504-201ENST00000410676 117 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 RNA5SP270-201ENST00000411361 118 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 AC022616.4-201ENST00000522985 181 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 MIR4659A-201ENST00000580269 81 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 MIR5194-201ENST00000582634 120 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 AL353621.2-201ENST00000605340 133 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 SNORD14A-201ENST00000606526 91 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 AC116312.1-201ENST00000606841 314 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 MIR6840-201ENST00000611937 71 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 AC022202.1-201ENST00000613515 211 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 AL357075.2-201ENST00000614906 189 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 AC007742.2-201ENST00000618226 398 ntBASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHMP4CQ96CF2 MIRLET7G-201ENST00000362280 84 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 RNU6-450P-201ENST00000364654 107 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 RNU1-52P-201ENST00000384190 164 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 Y_RNA.498-201ENST00000384460 102 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 MIR524-201ENST00000385242 87 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 Y_RNA.645-201ENST00000391229 102 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 RN7SKP284-201ENST00000411002 343 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 RPS15AP28-201ENST00000435088 386 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 RNU6-625P-201ENST00000459412 107 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 AC010469.2-201ENST00000496412 480 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 RNU6-1012P-201ENST00000516606 109 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 RNA5SP137-201ENST00000516833 135 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 MIR4680-201ENST00000580906 66 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 MIR5007-201ENST00000583098 95 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 AL121655.1-201ENST00000605811 308 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 AL162373.1-201ENST00000620433 407 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 AC130454.1-201ENST00000622948 401 ntBASIC2.77□□□□□ -1.97
CHMP4CQ96CF2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 U8.2-201ENST00000363156 134 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 RNU6-975P-201ENST00000384296 105 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 Y_RNA.471-201ENST00000384312 102 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 MIR29C-201ENST00000385231 88 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 RNU6-823P-201ENST00000391042 103 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 AC139712.2-201ENST00000424302 339 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 NDUFB4P10-201ENST00000452541 359 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 RNU7-57P-201ENST00000459540 60 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 RNU6-948P-201ENST00000516374 107 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 RNU2-34P-201ENST00000516534 121 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 AC018448.1-201ENST00000552843 316 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 AC233702.2-202ENST00000562547 291 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 AC104695.3-201ENST00000604052 296 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 AC103810.6-201ENST00000606708 136 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 AC011476.5-201ENST00000615594 130 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHMP4CQ96CF2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 SNORA63.7-201ENST00000365579 123 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 RNU6-418P-201ENST00000384035 107 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 Y_RNA.455-201ENST00000384230 98 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 Y_RNA.527-201ENST00000384573 102 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 RNU6-160P-201ENST00000384591 107 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 U8.20-201ENST00000459445 131 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 RNU6-408P-201ENST00000515910 100 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 MIR3945-201ENST00000581853 98 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 Y_RNA.772-201ENST00000606692 102 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 MIR6895-201ENST00000613497 78 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 AC240442.1-201ENST00000616055 283 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP4CQ96CF2 MTND5P6-201ENST00000422338 1798 ntBASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 LINC02555-201ENST00000563933 1951 ntBASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 RNU6-1264P-201ENST00000383891 107 ntBASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 MIR548B-201ENST00000385247 97 ntBASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 SNORA40.19-201ENST00000390846 128 ntBASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 MRPL35P1-201ENST00000404272 572 ntBASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 TOMM22P2-201ENST00000430735 237 ntBASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 AC016717.1-201ENST00000448918 286 ntBASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 AC010531.2-201ENST00000465012 153 ntBASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 Y_RNA.713-201ENST00000517013 96 ntBASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHMP4CQ96CF2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 SNORA6-201ENST00000384033 151 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 RNU6-1235P-201ENST00000384559 107 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 Y_RNA.551-201ENST00000384661 102 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 MIR144-201ENST00000384886 86 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 ELOCP21-201ENST00000412558 336 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 AL357134.1-201ENST00000445848 426 ntBASIC2.73□□□□□ -1.97
CHMP4CQ96CF2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms