Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 Y_RNA.229-201ENST00000364347 113 ntBASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 U8.7-201ENST00000364940 136 ntBASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 MIR29B2-201ENST00000385055 81 ntBASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 RPL23AP7-203ENST00000449021 469 ntBASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 RPS4XP2-201ENST00000458402 793 ntBASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 IGKV2-26-201ENST00000518305 343 ntBASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 MIR5680-201ENST00000577577 84 ntBASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 AL391903.3-201ENST00000612158 163 ntBASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.9□□□□□ -1.78
VTI1AQ96AJ9 RNU6-944P-201ENST00000364023 107 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 SNORD50B-201ENST00000364995 70 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 SNORA20B-201ENST00000384220 132 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 MIR1283-1-201ENST00000408494 87 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 MIR1289-1-201ENST00000408836 144 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 RNU6-383P-201ENST00000410864 94 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 AL121890.1-201ENST00000435457 205 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 RNU7-14P-201ENST00000459331 62 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 RN7SL504P-201ENST00000494496 287 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 RNU6-561P-201ENST00000516222 102 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 RNVU1-4-201ENST00000612985 164 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 MIR6852-201ENST00000621699 66 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 AC012640.5-201ENST00000623897 319 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 AL021368.2-201ENST00000606125 5352 ntBASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VTI1AQ96AJ9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 RNU1-72P-201ENST00000362976 153 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 SNORD14D-201ENST00000384390 87 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 SNORD116-13-201ENST00000384408 92 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 RNU6-1274P-201ENST00000384557 107 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 MIR873-201ENST00000401120 77 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 AC006461.1-201ENST00000412637 326 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 HSPE1P21-201ENST00000438283 308 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 AL137159.1-201ENST00000452808 512 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 RNU7-57P-201ENST00000459540 60 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 AC117454.1-201ENST00000491120 168 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 AC002064.3-201ENST00000623448 346 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 AC068647.2-201ENST00000637380 353 ntBASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VTI1AQ96AJ9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 SNORD114-7-201ENST00000362520 77 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 SNORA20-201ENST00000384662 132 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 Z98941.1-201ENST00000407764 100 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 MTND4LP9-201ENST00000427694 174 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 AL121914.1-201ENST00000450188 156 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 ATP5EP1-201ENST00000510257 156 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 MRPS36P2-201ENST00000512569 299 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 RNU7-115P-201ENST00000516433 55 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 RNU6-1337P-201ENST00000516525 95 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 MIR4724-201ENST00000579485 89 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 MIR4425-201ENST00000580572 84 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 MIR5688-201ENST00000580619 83 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 MIR548AY-201ENST00000617669 107 ntBASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
VTI1AQ96AJ9 AC138915.1-201ENST00000565427 1685 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 AC068647.1-201ENST00000489539 2265 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 RNA5SP374-201ENST00000362939 125 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 RNU6-144P-201ENST00000383951 107 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 Y_RNA.500-201ENST00000384466 111 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 SNORA40-201ENST00000388090 126 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 AL606845.1-201ENST00000404881 255 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 MIR1294-201ENST00000408503 142 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 RN7SL594P-201ENST00000470590 287 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 FCF1P8-201ENST00000510322 597 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 RAC1P5-201ENST00000512182 576 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 PHBP14-201ENST00000512887 367 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 RNA5SP112-201ENST00000515937 99 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 MIR4276-201ENST00000584832 70 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 AC023043.3-201ENST00000593113 385 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 UCA1.1-201ENST00000620952 75 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VTI1AQ96AJ9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms