Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC019193.3-201ENST00000609144 554 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 AC022202.1-201ENST00000613515 211 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 SNORA43.4-201ENST00000629559 138 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 SNORD115-8-201ENST00000363856 82 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 SNORD115-38-201ENST00000365037 82 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.339-201ENST00000365325 102 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 SNORA29-201ENST00000384183 140 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 SNORA36A-201ENST00000384221 132 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 RNU2-41P-201ENST00000410991 178 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AC139712.2-201ENST00000424302 339 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AL353997.1-201ENST00000432936 108 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AL353572.1-201ENST00000442490 417 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 CYP2C59P-201ENST00000457790 269 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 RNA5SP384-201ENST00000516615 116 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 RNU6-1016P-201ENST00000516689 94 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 CYP2C61P-201ENST00000604072 290 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 SNORD14A-201ENST00000606526 91 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AL132765.2-201ENST00000610812 351 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AC137590.2-201ENST00000619709 240 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AC091932.3-201ENST00000624223 323 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 RNU6-562P-201ENST00000362731 107 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 SNORD114-6-201ENST00000364393 72 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 RNU6-1013P-201ENST00000384180 107 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 RNU6-842P-201ENST00000384269 107 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 RNU6-611P-201ENST00000384276 104 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 MT-TL1-201ENST00000386347 75 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 MIR1197-201ENST00000408818 88 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 RPL17P19-201ENST00000489069 552 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AC114801.2-201ENST00000503825 781 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AC027288.2-201ENST00000553028 243 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AL050343.2-201ENST00000607338 280 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 AL132822.1-201ENST00000617063 513 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 MIR1248-201ENST00000629190 106 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 MIR924-201ENST00000638017 53 ntBASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SHROOM3Q8TF72 RNU6-862P-201ENST00000362804 105 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 RNU6-727P-201ENST00000363592 107 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.279-201ENST00000364763 95 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.332-201ENST00000365271 113 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 MIR208B-201ENST00000401172 77 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 AL356776.1-201ENST00000406574 447 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 MIR1283-1-201ENST00000408494 87 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 AC074085.1-201ENST00000413598 418 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 RBMX2P4-201ENST00000441256 376 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 RPL23AP75-201ENST00000491601 451 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 AC016256.1-201ENST00000547971 354 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 MIR4790-201ENST00000577799 79 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 RBM11P1-201ENST00000604951 799 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 AC104260.1-201ENST00000616660 539 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 MTND5P9-201ENST00000503854 1755 ntBASIC1.09□□□□□ -2.23
SHROOM3Q8TF72 MIR330-201ENST00000362196 94 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 RNU5B-2P-201ENST00000363036 113 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.132-201ENST00000363421 102 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 SNORD116-11-201ENST00000383882 92 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 MIR1283-2-201ENST00000408621 87 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 MTND3P8-201ENST00000412909 339 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 USP9YP30-201ENST00000430729 455 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 RPL23AP3-201ENST00000453844 468 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 RNU6-667P-201ENST00000517186 102 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 RNU6-743P-201ENST00000364151 106 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 RNU6-593P-201ENST00000364716 112 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 SNORA40.19-201ENST00000390846 128 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 MIR936-201ENST00000401264 98 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 RPL21P111-201ENST00000418453 477 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 USP9YP16-201ENST00000430287 407 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 USP9YP23-201ENST00000455085 407 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 AC114982.1-201ENST00000469402 321 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 RNU1-54P-201ENST00000517181 120 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 RNA5SP454-201ENST00000517231 127 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 EIF4A1P12-201ENST00000551910 141 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 AL355802.3-201ENST00000607571 545 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 AC080100.1-201ENST00000624239 5356 ntBASIC1.08□□□□□ -2.24
SHROOM3Q8TF72 ZNF299P-201ENST00000406845 1804 ntBASIC1.07□□□□□ -2.24
SHROOM3Q8TF72 Y_RNA.86-201ENST00000363020 111 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms