Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNU1-76P-201ENST00000362903 159 ntBASIC-0.34□□□□□ -2.46
ALMS1Q8TCU4 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.34□□□□□ -2.46
ALMS1Q8TCU4 MIR1302-7-201ENST00000408841 72 ntBASIC-0.34□□□□□ -2.46
ALMS1Q8TCU4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.34□□□□□ -2.46
ALMS1Q8TCU4 AC093019.1-201ENST00000443135 252 ntBASIC-0.34□□□□□ -2.46
ALMS1Q8TCU4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.34□□□□□ -2.46
ALMS1Q8TCU4 RNU6-448P-201ENST00000517052 107 ntBASIC-0.34□□□□□ -2.46
ALMS1Q8TCU4 MIR4666A-201ENST00000580160 79 ntBASIC-0.34□□□□□ -2.46
ALMS1Q8TCU4 CDR1-202ENST00000625883 1485 ntBASIC-0.34□□□□□ -2.46
ALMS1Q8TCU4 SNORD56.1-201ENST00000362913 68 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 MIR802-201ENST00000390235 94 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 PCNPP3-201ENST00000393579 471 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 MIR1253-201ENST00000408273 105 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 MIR1298-201ENST00000408783 112 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 MRPS10P2-201ENST00000431226 381 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 HSFY5P-201ENST00000453726 309 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 AC010468.3-201ENST00000508225 458 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 AC021451.1-201ENST00000523498 1129 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 MIR4742-201ENST00000581069 85 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 MIR4804-201ENST00000581683 73 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 AC110760.3-201ENST00000598794 467 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 AP002360.4-201ENST00000606980 481 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 RN7SL660P-201ENST00000614852 299 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.35□□□□□ -2.46
ALMS1Q8TCU4 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 MIR892B-201ENST00000401279 77 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AC016925.1-201ENST00000458303 298 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 HMGN2P26-201ENST00000463169 339 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 RPL39P36-201ENST00000490784 156 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 MLLT10P1-201ENST00000418346 262 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AC109327.2-201ENST00000448339 378 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 ZNF886P-201ENST00000450781 723 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 PCNPP5-201ENST00000452246 481 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AC133485.4-201ENST00000561835 220 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AL670379.3-201ENST00000605040 251 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 RNU6-744P-201ENST00000365557 107 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 MTCO2P33-201ENST00000402100 465 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 RNU4-46P-201ENST00000410818 138 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 RNU6-293P-201ENST00000411259 106 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AL365184.2-201ENST00000431139 435 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AL139824.2-201ENST00000458731 1095 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 SNORA31.3-201ENST00000516029 96 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AP001372.4-201ENST00000524889 472 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 AC023442.1-201ENST00000531247 422 ntBASIC-0.35□□□□□ -2.47
ALMS1Q8TCU4 MTND4P4-201ENST00000439033 1366 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 MIR340-201ENST00000362125 95 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 RNU6-364P-201ENST00000384387 107 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 RPS3AP3-201ENST00000411933 242 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AC015818.7-201ENST00000428754 109 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AC087499.7-201ENST00000441958 109 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 MIR4432-201ENST00000581823 84 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AP000907.4-201ENST00000604143 237 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AL359547.2-201ENST00000615810 418 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 MTND5P33-201ENST00000571250 1450 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AL136310.1-201ENST00000404926 654 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AL163973.1-201ENST00000484753 577 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 RNU4-49P-201ENST00000516080 140 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 MIR4778-201ENST00000577635 80 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AC125232.2-201ENST00000592457 143 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 SNORA27.3-201ENST00000364937 134 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AL359634.1-202ENST00000404721 284 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AL953862.1-201ENST00000423016 168 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 BX119904.4-201ENST00000424402 301 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 MTCO3P9-201ENST00000506989 781 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 SNORA31.10-201ENST00000516482 106 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AC022616.3-201ENST00000523940 148 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AC246785.4-201ENST00000605374 287 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 U6.42-201ENST00000618440 107 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 AC231657.1-201ENST00000624313 397 ntBASIC-0.36□□□□□ -2.47
ALMS1Q8TCU4 SNORD14.1-201ENST00000365609 90 ntBASIC-0.37□□□□□ -2.47
ALMS1Q8TCU4 SNORA67.2-201ENST00000384300 149 ntBASIC-0.37□□□□□ -2.47
ALMS1Q8TCU4 MIR204-201ENST00000385200 110 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms