Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.07□□□□□ -2.24
LINC01560Q8TB33 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
LINC01560Q8TB33 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LINC01560Q8TB33 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU6-414P-201ENST00000363705 104 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 SNORD115-8-201ENST00000363856 82 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU6-534P-201ENST00000364877 106 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 SNORD115-38-201ENST00000365037 82 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU6-831P-201ENST00000384548 107 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU2-7P-201ENST00000410794 178 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU6-373P-201ENST00000411247 98 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU6-57P-201ENST00000411348 103 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AC016909.1-201ENST00000415916 166 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 CST2P1-201ENST00000425770 87 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AL445305.1-201ENST00000432577 575 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 HMGN2P34-201ENST00000437647 269 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AC112492.4-201ENST00000456549 352 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 snoU13.9-201ENST00000458927 103 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU7-57P-201ENST00000459540 60 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AC114982.1-201ENST00000469402 321 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 FO393415.2-201ENST00000480085 343 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AC027575.1-201ENST00000481064 460 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RPS29P25-201ENST00000481709 171 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RPL30P10-201ENST00000488148 337 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 HMGN1P13-201ENST00000505795 138 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01560Q8TB33 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU6-864P-201ENST00000516256 108 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU6-344P-201ENST00000516635 111 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU6-1088P-201ENST00000516850 104 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU6-273P-201ENST00000516937 96 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU1-117P-201ENST00000517041 158 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU6-1314P-201ENST00000517139 104 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AC124303.1-201ENST00000605703 360 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AC009033.1-201ENST00000624279 431 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AL359697.1-201ENST00000624879 587 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AC008873.1-201ENST00000625051 138 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 AC100810.6-201ENST00000638068 285 ntBASIC1.06□□□□□ -2.24
LINC01560Q8TB33 RNU1-62P-201ENST00000362599 164 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 snoU2-30.2-201ENST00000362805 70 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 RNU6-271P-201ENST00000363858 105 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 SNORD115-32-201ENST00000364079 82 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 Y_RNA.287-201ENST00000364853 94 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 Y_RNA.295-201ENST00000364918 102 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 MIR758-201ENST00000390227 88 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 RNU6-360P-201ENST00000390944 104 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 MIR1267-201ENST00000408723 78 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 JTBP1-201ENST00000441314 247 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.05□□□□□ -2.24
LINC01560Q8TB33 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.05□□□□□ -2.24
LINC01560Q8TB33 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.05□□□□□ -2.24
LINC01560Q8TB33 ACA59.1-201ENST00000515966 143 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 RNA5SP54-201ENST00000516951 92 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 RNU6-58P-201ENST00000517143 103 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.05□□□□□ -2.24
LINC01560Q8TB33 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.05□□□□□ -2.24
LINC01560Q8TB33 AC027288.2-201ENST00000553028 243 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 RMST_2.1-201ENST00000617263 136 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 AL078596.1-201ENST00000624856 447 ntBASIC1.05□□□□□ -2.24
LINC01560Q8TB33 AC100821.1-201ENST00000523153 2479 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 MIR302D-201ENST00000362275 68 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 SNORD87-201ENST00000364849 89 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 Y_RNA.319-201ENST00000365138 92 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 SNORA4.2-201ENST00000365313 147 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 RNU6-417P-201ENST00000384712 107 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 MIR520E-201ENST00000384867 87 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 SNORD115-47-201ENST00000391226 86 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01560Q8TB33 MTCO3P29-201ENST00000432119 779 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 MTATP6P13-201ENST00000438531 667 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 AC073910.1-201ENST00000445047 438 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01560Q8TB33 HSPE1P24-201ENST00000450782 238 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 AK6P2-201ENST00000549020 471 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01560Q8TB33 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.04□□□□□ -2.24
LINC01560Q8TB33 MIR5696-201ENST00000578474 85 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 AC090517.2-201ENST00000614966 680 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01560Q8TB33 MIR3688-2-201ENST00000636963 87 ntBASIC1.04□□□□□ -2.24
LINC01560Q8TB33 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
LINC01560Q8TB33 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LINC01560Q8TB33 RNU6-1059P-201ENST00000363752 98 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 RNU6-873P-201ENST00000363833 107 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 RNU1-93P-201ENST00000364704 169 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 RNU6-245P-201ENST00000384020 107 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 Y_RNA.533-201ENST00000384596 114 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 RNU6-331P-201ENST00000384724 107 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 MIR153-2-201ENST00000385225 87 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 RNA5SP467-201ENST00000391274 118 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 MIR320B2-201ENST00000408479 138 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 MIR548F1-201ENST00000408667 84 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.03□□□□□ -2.24
LINC01560Q8TB33 AL161935.2-201ENST00000414627 60 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 EBAG9P1-201ENST00000418955 543 ntBASIC1.03□□□□□ -2.24
LINC01560Q8TB33 RPL30P16-201ENST00000419341 429 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms