Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AL133162.1-201ENST00000463228 453 ntBASIC4.49□□□□□ -1.69
NKX2-3Q8TAU0 RPS26P48-201ENST00000491713 339 ntBASIC4.49□□□□□ -1.69
NKX2-3Q8TAU0 RN7SKP57-201ENST00000517248 293 ntBASIC4.49□□□□□ -1.69
NKX2-3Q8TAU0 RNU6-91P-201ENST00000607774 107 ntBASIC4.49□□□□□ -1.69
NKX2-3Q8TAU0 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.49□□□□□ -1.69
NKX2-3Q8TAU0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-3Q8TAU0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-3Q8TAU0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-3Q8TAU0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 AL049781.1-201ENST00000623195 3585 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 RNU6-1010P-201ENST00000362757 107 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 RNU6-529P-201ENST00000363383 104 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 SNORA1-201ENST00000384107 130 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 AL031121.1-201ENST00000406553 254 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 AC004552.1-201ENST00000419089 348 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 AL353705.1-201ENST00000433468 480 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 AC245102.2-201ENST00000448956 180 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 RPS3P1-201ENST00000456781 192 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 RPS26P3-201ENST00000470205 348 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 RN7SL601P-201ENST00000471221 293 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 AC090543.2-201ENST00000483963 348 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 AC004057.1-201ENST00000485827 348 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 AC145146.1-201ENST00000496370 254 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 VWA8P1-201ENST00000510889 176 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 RNU6-857P-201ENST00000515893 110 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 SCARNA23-201ENST00000516060 130 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 AL929325.1-201ENST00000603096 117 ntBASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-3Q8TAU0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 AC080128.1-201ENST00000474389 1917 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 SNORA4.2-201ENST00000365313 147 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 RNU6-24P-201ENST00000384440 107 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 MIR708-201ENST00000390708 88 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 TRBV12-2-201ENST00000489763 344 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 RNA5SP20-201ENST00000515976 84 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 RNU6-830P-201ENST00000516353 107 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 RNU6-1149P-201ENST00000516810 97 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 AC008011.1-201ENST00000545989 227 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 MIR4666B-201ENST00000578142 81 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 AL591424.2-201ENST00000617023 128 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 MIR4662A-201ENST00000637499 67 ntBASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-3Q8TAU0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 Y_RNA.40-201ENST00000362645 93 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 RNU4-13P-201ENST00000364019 141 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 Y_RNA.796-201ENST00000364268 102 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 RNU4-36P-201ENST00000364294 144 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 Y_RNA.265-201ENST00000364677 108 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 Y_RNA.290-201ENST00000364879 114 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 Y_RNA.799-201ENST00000364992 102 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 SNORA51.4-201ENST00000364993 124 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 RNU6-497P-201ENST00000365316 104 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 RNA5SP511-201ENST00000410487 115 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 AC245291.1-201ENST00000419501 328 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 SNORD65B-201ENST00000459126 73 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 RNU2-13P-201ENST00000515909 113 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 SCARNA15-202ENST00000516881 127 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 RN7SKP289-201ENST00000517244 295 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 DEFB131E-201ENST00000532329 154 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 MIR4727-201ENST00000622232 55 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 AC007496.3-201ENST00000624987 3443 ntBASIC4.46□□□□□ -1.7
NKX2-3Q8TAU0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 RNA5SP51-201ENST00000364750 119 ntBASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 RNU6-675P-201ENST00000384236 104 ntBASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 AL139095.1-201ENST00000404326 391 ntBASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 BX510359.1-201ENST00000456973 237 ntBASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 AC084357.1-201ENST00000473404 255 ntBASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 HMGN2P9-201ENST00000476875 229 ntBASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 MIR5187-201ENST00000583479 76 ntBASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 MIR3922-201ENST00000585192 84 ntBASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 AL137849.1-201ENST00000604767 169 ntBASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 AL110115.1-201ENST00000614396 364 ntBASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms