Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 SNRPGP20-201ENST00000604477 205 ntBASIC1.52□□□□□ -2.17
LINC01006Q8NI28 SNORD58B-201ENST00000607313 66 ntBASIC1.52□□□□□ -2.17
LINC01006Q8NI28 AC006157.1-201ENST00000611750 366 ntBASIC1.52□□□□□ -2.17
LINC01006Q8NI28 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01006Q8NI28 AL357075.2-201ENST00000614906 189 ntBASIC1.52□□□□□ -2.17
LINC01006Q8NI28 MIR4272-201ENST00000635924 64 ntBASIC1.52□□□□□ -2.17
LINC01006Q8NI28 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LINC01006Q8NI28 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
LINC01006Q8NI28 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC01006Q8NI28 ZNF720P1-201ENST00000562403 1939 ntBASIC1.52□□□□□ -2.17
LINC01006Q8NI28 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
LINC01006Q8NI28 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
LINC01006Q8NI28 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
LINC01006Q8NI28 Y_RNA.148-201ENST00000363557 117 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 SNORD87-201ENST00000364849 89 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 Y_RNA.415-201ENST00000384012 112 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 AL033519.2-201ENST00000403958 392 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 MIR548P-201ENST00000408336 84 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 MCFD2P1-201ENST00000417812 300 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 AC114482.1-201ENST00000418010 247 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 AL160004.2-201ENST00000432935 350 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 MTND4P19-201ENST00000446659 478 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 Y_RNA.631-201ENST00000459607 101 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 SNORA31.25-201ENST00000517242 134 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.51□□□□□ -2.17
LINC01006Q8NI28 AK6P2-201ENST00000549020 471 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC01006Q8NI28 AC026271.5-201ENST00000577873 130 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 MIR3171-201ENST00000584270 74 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 SNRPGP17-201ENST00000603780 214 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 SNRPGP19-201ENST00000603826 189 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 U2.1-201ENST00000618978 145 ntBASIC1.51□□□□□ -2.17
LINC01006Q8NI28 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC01006Q8NI28 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LINC01006Q8NI28 MIR340-201ENST00000362125 95 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 RNU6-1301P-201ENST00000362724 104 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 RNU6-137P-201ENST00000363680 108 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 RNU4-76P-201ENST00000364509 141 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 SNORA22B-201ENST00000383876 138 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 RNU6-245P-201ENST00000384020 107 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 RNU6-793P-201ENST00000384233 104 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 SNORA67.2-201ENST00000384300 149 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 RNU6-1026P-201ENST00000384465 108 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 MIR329-1-201ENST00000385028 80 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 AL357139.1-201ENST00000407792 426 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC01006Q8NI28 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01006Q8NI28 MTCYBP6-201ENST00000441810 138 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.5□□□□□ -2.17
LINC01006Q8NI28 RNU6-1198P-201ENST00000516904 67 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 Y_RNA.711-201ENST00000516993 102 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 RRN3P3-201ENST00000549207 578 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.5□□□□□ -2.17
LINC01006Q8NI28 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC01006Q8NI28 AC010999.1-201ENST00000611856 324 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 AC134503.1-201ENST00000633048 54 ntBASIC1.5□□□□□ -2.17
LINC01006Q8NI28 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC01006Q8NI28 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LINC01006Q8NI28 Y_RNA.128-201ENST00000363391 112 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 Y_RNA.179-201ENST00000363844 90 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 RNU6-280P-201ENST00000364145 104 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 SNORD31B-201ENST00000364977 69 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 RNU1-115P-201ENST00000365329 160 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 MIR628-201ENST00000385229 95 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 SNORA40.19-201ENST00000390846 128 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 MIR1283-1-201ENST00000408494 87 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 Y_RNA.595-201ENST00000410403 105 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AC016717.1-201ENST00000448918 286 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AL137159.1-201ENST00000452808 512 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AC016925.1-201ENST00000458303 298 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AC010531.2-201ENST00000465012 153 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 HMGN2P9-201ENST00000476875 229 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 RNU6-344P-201ENST00000516635 111 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AC144568.1-201ENST00000520139 137 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AC121758.2-201ENST00000553271 193 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 MIR5188-201ENST00000583467 113 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AC078899.2-201ENST00000595282 212 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AL031274.2-201ENST00000599419 203 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AL356055.1-201ENST00000602528 446 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 MIR6895-201ENST00000613497 78 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AL606534.2-204ENST00000635008 178 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
LINC01006Q8NI28 MTND4P1-201ENST00000457501 1466 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 MTND5P35-201ENST00000557537 1720 ntBASIC1.49□□□□□ -2.17
LINC01006Q8NI28 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
LINC01006Q8NI28 AC091812.1-201ENST00000432235 1948 ntBASIC1.48□□□□□ -2.17
LINC01006Q8NI28 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01006Q8NI28 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01006Q8NI28 Y_RNA.28-201ENST00000362554 111 ntBASIC1.48□□□□□ -2.17
LINC01006Q8NI28 RNU1-62P-201ENST00000362599 164 ntBASIC1.48□□□□□ -2.17
LINC01006Q8NI28 Y_RNA.39-201ENST00000362620 98 ntBASIC1.48□□□□□ -2.17
LINC01006Q8NI28 RNU6-1305P-201ENST00000364353 104 ntBASIC1.48□□□□□ -2.17
LINC01006Q8NI28 Y_RNA.332-201ENST00000365271 113 ntBASIC1.48□□□□□ -2.17
LINC01006Q8NI28 RNU6-438P-201ENST00000365561 103 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms