Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNA5SP504-201ENST00000410676 117 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 AC133104.1-201ENST00000429100 218 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 MTND3P9-201ENST00000429526 346 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 RNA5SP255-201ENST00000516370 107 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 SNORA18.6-201ENST00000516792 115 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 AC245884.10-201ENST00000597355 337 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 SNRPGP20-201ENST00000604477 205 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 AC064836.2-201ENST00000609491 462 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 RMST_3.1-201ENST00000611651 109 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 SCARNA4-201ENST00000629045 128 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 MIR924-201ENST00000638017 53 ntBASIC0.51□□□□□ -2.33
CCDC112Q8NEF3 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 MIR10B-201ENST00000385011 110 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 RNU6-1106P-201ENST00000390845 107 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 AL355796.1-201ENST00000406706 323 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 RNU2-9P-201ENST00000410194 145 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 AC008134.1-201ENST00000420943 193 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 AL356010.1-201ENST00000456364 102 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 RNU7-180P-201ENST00000459240 63 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 AF186996.7-201ENST00000492781 209 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 RNU6-344P-201ENST00000516635 111 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 AC090049.2-201ENST00000550377 109 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 MIR4778-201ENST00000577635 80 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 FGF7P1-201ENST00000582820 288 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 AC009229.3-201ENST00000608056 282 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 AL078596.1-201ENST00000624856 447 ntBASIC0.5□□□□□ -2.33
CCDC112Q8NEF3 ELL2P3-201ENST00000457883 1602 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 RNU6-110P-201ENST00000384508 104 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 RNA5SP193-201ENST00000410353 107 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 RNU7-21P-201ENST00000459430 62 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 RNU6-947P-201ENST00000516264 106 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 RNU6-917P-201ENST00000516294 104 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 AC087854.1-201ENST00000519706 414 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 APOOP3-201ENST00000536787 586 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 HIF1AP1-201ENST00000553642 175 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 AL162424.1-201ENST00000602325 221 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 AC068790.6-201ENST00000602558 258 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 AC243829.6-201ENST00000612652 106 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 AC016597.2-201ENST00000613256 341 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 U6.73-201ENST00000619194 103 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 AC079248.2-201ENST00000623779 326 ntBASIC0.49□□□□□ -2.33
CCDC112Q8NEF3 RNU4-21P-201ENST00000362802 126 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 RNU6-199P-201ENST00000362954 107 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 RNU6-553P-201ENST00000364047 96 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 RNU6-517P-201ENST00000384362 110 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 MIR487A-201ENST00000385009 80 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 RNU6-1186P-201ENST00000410429 97 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 RNU7-125P-201ENST00000458760 62 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 CCDC34P1-201ENST00000507441 517 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 RNU7-99P-201ENST00000516271 62 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 AL353765.1-201ENST00000605514 183 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 HULC.1-201ENST00000612720 240 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 AC068792.1-201ENST00000621354 417 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 OR5AK4P-201ENST00000635912 903 ntBASIC0.48□□□□□ -2.33
CCDC112Q8NEF3 Y_RNA.123-201ENST00000363338 102 ntBASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 RNU6-1317P-201ENST00000364582 104 ntBASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 MIR450B-201ENST00000401182 78 ntBASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 AL035398.1-201ENST00000430869 322 ntBASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 SNORA14.1-201ENST00000516113 141 ntBASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 RNU6-232P-201ENST00000517144 64 ntBASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 SCOCP1-201ENST00000554676 349 ntBASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 FRG2DP-202ENST00000566967 323 ntBASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 AC087683.2-201ENST00000611384 326 ntBASIC0.47□□□□□ -2.33
CCDC112Q8NEF3 ZNF204P-201ENST00000416749 2397 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 AP000568.1-201ENST00000282964 442 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 MTATP6P19-201ENST00000413797 659 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 MTCYBP8-201ENST00000422855 651 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 MTCO2P11-201ENST00000431069 680 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 MTND4P32-201ENST00000437189 1237 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 RPS20P10-201ENST00000451209 253 ntBASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.46□□□□□ -2.34
CCDC112Q8NEF3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms