Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 RNU6-128P-201ENST00000383976 107 ntBASIC1.89□□□□□ -2.11
NME8Q8N427 MIR1253-201ENST00000408273 105 ntBASIC1.89□□□□□ -2.11
NME8Q8N427 MTND1P17-201ENST00000448961 204 ntBASIC1.89□□□□□ -2.11
NME8Q8N427 snoU13.30-201ENST00000458951 104 ntBASIC1.89□□□□□ -2.11
NME8Q8N427 RPS26P55-201ENST00000471178 356 ntBASIC1.89□□□□□ -2.11
NME8Q8N427 SNORA20.3-201ENST00000516880 132 ntBASIC1.89□□□□□ -2.11
NME8Q8N427 DEFB131C-201ENST00000528817 165 ntBASIC1.89□□□□□ -2.11
NME8Q8N427 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.89□□□□□ -2.11
NME8Q8N427 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.89□□□□□ -2.11
NME8Q8N427 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.89□□□□□ -2.11
NME8Q8N427 SNORA77B-201ENST00000578179 125 ntBASIC1.89□□□□□ -2.11
NME8Q8N427 POLR3GP2-201ENST00000588366 668 ntBASIC1.89□□□□□ -2.11
NME8Q8N427 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.89□□□□□ -2.11
NME8Q8N427 AC068205.3-201ENST00000636385 468 ntBASIC1.89□□□□□ -2.11
NME8Q8N427 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NME8Q8N427 SNORA72.1-201ENST00000363485 129 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 RNU6-271P-201ENST00000363858 105 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 Y_RNA.339-201ENST00000365325 102 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 RNU6-331P-201ENST00000384724 107 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 RNU6-997P-201ENST00000384725 107 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NME8Q8N427 RNU6-510P-201ENST00000391239 108 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 MIR548K-201ENST00000408406 116 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 RN7SKP51-201ENST00000410781 304 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 AC099677.2-201ENST00000436385 175 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 AC079354.2-201ENST00000453523 154 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 RNU1-98P-201ENST00000458992 160 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 snoU13.27-201ENST00000459278 104 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 AC007215.1-201ENST00000464893 276 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 RPL31P58-201ENST00000469001 379 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.88□□□□□ -2.11
NME8Q8N427 AC091951.2-201ENST00000500762 203 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.88□□□□□ -2.11
NME8Q8N427 PRDX4P1-201ENST00000507189 574 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 Y_RNA.670-201ENST00000516255 105 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 RNA5SP54-201ENST00000516951 92 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 RRN3P3-201ENST00000549207 578 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.88□□□□□ -2.11
NME8Q8N427 MIR4498-201ENST00000577599 66 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 PRR13P7-201ENST00000605538 430 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 MTND5P35-201ENST00000557537 1720 ntBASIC1.88□□□□□ -2.11
NME8Q8N427 Y_RNA.88-201ENST00000363029 99 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 Y_RNA.404-201ENST00000383978 102 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 RNU6-975P-201ENST00000384296 105 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 MIR586-201ENST00000385035 97 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 FGF7P8-201ENST00000402994 292 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 Y_RNA.595-201ENST00000410403 105 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 AC245047.4-201ENST00000433189 144 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 AL353572.1-201ENST00000442490 417 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.87□□□□□ -2.11
NME8Q8N427 RNA5SP384-201ENST00000516615 116 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 AC024614.2-201ENST00000577584 372 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 MIR3937-201ENST00000580135 106 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 MIR3618-201ENST00000580330 88 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 AC016727.2-201ENST00000603988 621 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 AC124303.1-201ENST00000605703 360 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 AL355073.2-201ENST00000612106 557 ntBASIC1.87□□□□□ -2.11
NME8Q8N427 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.87□□□□□ -2.11
NME8Q8N427 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.86□□□□□ -2.11
NME8Q8N427 RNU5F-3P-201ENST00000363767 117 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 Y_RNA.338-201ENST00000365320 114 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 RNU6-1013P-201ENST00000384180 107 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 U8.10-201ENST00000384260 133 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 RNU6-784P-201ENST00000384330 106 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 AC007098.1-201ENST00000420122 367 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 AC008134.1-201ENST00000420943 193 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 MTND3P10-201ENST00000450967 341 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 RN7SKP210-201ENST00000459176 261 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 RPL23AP75-201ENST00000491601 451 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.86□□□□□ -2.11
NME8Q8N427 AC026782.1-201ENST00000512952 449 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 AC024995.1-201ENST00000523014 93 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 CBX3P8-201ENST00000532412 525 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 AL121579.1-201ENST00000555129 305 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 AL355802.3-201ENST00000607571 545 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 AC022306.2-201ENST00000617563 647 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 AC099654.5-201ENST00000636479 350 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 TPTEP1-208ENST00000636884 213 ntBASIC1.86□□□□□ -2.11
NME8Q8N427 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NME8Q8N427 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 Y_RNA.70-201ENST00000362886 110 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 Y_RNA.72-201ENST00000362894 103 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 Y_RNA.594-201ENST00000410373 140 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 AC004866.1-201ENST00000411748 78 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 AC060773.1-201ENST00000421698 310 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.85□□□□□ -2.11
NME8Q8N427 AC092473.1-201ENST00000441098 221 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 RPL30P10-201ENST00000488148 337 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.85□□□□□ -2.11
NME8Q8N427 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.85□□□□□ -2.11
NME8Q8N427 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.85□□□□□ -2.11
NME8Q8N427 AC104581.2-201ENST00000572227 430 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 MIR4709-201ENST00000577272 72 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 RBM11P1-201ENST00000604951 799 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 AC009229.3-201ENST00000608056 282 ntBASIC1.85□□□□□ -2.11
NME8Q8N427 MTND5P10-201ENST00000603719 1809 ntBASIC1.84□□□□□ -2.11
NME8Q8N427 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
NME8Q8N427 RNU6-1305P-201ENST00000364353 104 ntBASIC1.84□□□□□ -2.11
NME8Q8N427 SNORD1A-201ENST00000364968 72 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms