Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RPS3AP3-201ENST00000411933 242 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 MTND1P17-201ENST00000448961 204 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 AP000870.1-201ENST00000472927 406 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 AC010468.3-201ENST00000508225 458 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 RNU6-848P-201ENST00000515948 107 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 RNU6-617P-201ENST00000516147 107 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 RNU6-473P-201ENST00000516164 107 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 AC174048.1-201ENST00000603389 144 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 AL022154.1-201ENST00000604698 785 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 SMIM11P1-201ENST00000369586 178 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 MIR454-201ENST00000390180 115 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 RNU2-42P-201ENST00000410697 113 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 AC016632.1-201ENST00000503994 196 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 RNU6-567P-201ENST00000516746 107 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 MTCO3P15-201ENST00000526563 574 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 DEFB108A-201ENST00000530110 222 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 RMST_7.1-201ENST00000621935 268 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 MIR4320-201ENST00000636981 65 ntBASIC-1.06□□□□□ -2.58
VPS8Q8N3P4 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 RNU6-853P-201ENST00000364306 107 ntBASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 MIR601-201ENST00000385256 79 ntBASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 AC007547.1-201ENST00000462177 490 ntBASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 Z99497.2-201ENST00000603634 310 ntBASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 AC104458.1-201ENST00000608243 463 ntBASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 AC131159.1-201ENST00000621854 213 ntBASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 AC099654.8-201ENST00000637757 681 ntBASIC-1.07□□□□□ -2.58
VPS8Q8N3P4 RNU6-378P-201ENST00000384324 107 ntBASIC-1.08□□□□□ -2.58
VPS8Q8N3P4 RNU6-424P-201ENST00000384367 105 ntBASIC-1.08□□□□□ -2.58
VPS8Q8N3P4 U8.16-201ENST00000391279 133 ntBASIC-1.08□□□□□ -2.58
VPS8Q8N3P4 MIR1468-201ENST00000410600 86 ntBASIC-1.08□□□□□ -2.58
VPS8Q8N3P4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.08□□□□□ -2.58
VPS8Q8N3P4 MTND4P15-201ENST00000437913 1033 ntBASIC-1.08□□□□□ -2.58
VPS8Q8N3P4 USP9YP25-201ENST00000457708 443 ntBASIC-1.08□□□□□ -2.58
VPS8Q8N3P4 RNU7-94P-201ENST00000459576 63 ntBASIC-1.08□□□□□ -2.58
VPS8Q8N3P4 AC007684.1-201ENST00000609671 477 ntBASIC-1.08□□□□□ -2.58
VPS8Q8N3P4 AL157770.1-201ENST00000623049 439 ntBASIC-1.08□□□□□ -2.58
VPS8Q8N3P4 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 RNU6-925P-201ENST00000384629 104 ntBASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 RNU2-3P-201ENST00000410144 191 ntBASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 CALM2P4-201ENST00000430810 426 ntBASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 AC005002.2-201ENST00000438228 269 ntBASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 AC119751.4-201ENST00000507498 357 ntBASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 MIR4723-201ENST00000585070 81 ntBASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 MIR6755-201ENST00000619993 66 ntBASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 U6.108-201ENST00000637764 58 ntBASIC-1.09□□□□□ -2.58
VPS8Q8N3P4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-1.1□□□□□ -2.59
VPS8Q8N3P4 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.1□□□□□ -2.59
VPS8Q8N3P4 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.1□□□□□ -2.59
VPS8Q8N3P4 SNORA3B-201ENST00000391305 131 ntBASIC-1.1□□□□□ -2.59
VPS8Q8N3P4 AC006366.1-201ENST00000422002 759 ntBASIC-1.1□□□□□ -2.59
VPS8Q8N3P4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.1□□□□□ -2.59
VPS8Q8N3P4 MIR3165-201ENST00000579874 75 ntBASIC-1.1□□□□□ -2.59
VPS8Q8N3P4 RNA5SP192-201ENST00000364404 120 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 MIR549A-201ENST00000385268 96 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 RNA5SP163-201ENST00000410304 99 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 HSFY7P-201ENST00000432672 318 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 HSFY8P-201ENST00000437934 318 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 AC026414.1-201ENST00000504046 698 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 AC093023.1-201ENST00000547375 507 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 AC008752.3-201ENST00000588113 712 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 AC078795.3-201ENST00000602913 472 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 FRG1KP-201ENST00000623592 341 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 AC103706.2-201ENST00000638080 240 ntBASIC-1.11□□□□□ -2.59
VPS8Q8N3P4 SNORD114-14-201ENST00000362723 75 ntBASIC-1.12□□□□□ -2.59
VPS8Q8N3P4 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.12□□□□□ -2.59
VPS8Q8N3P4 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.12□□□□□ -2.59
VPS8Q8N3P4 RNU6-975P-201ENST00000384296 105 ntBASIC-1.12□□□□□ -2.59
VPS8Q8N3P4 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.12□□□□□ -2.59
VPS8Q8N3P4 AC105029.1-201ENST00000520250 669 ntBASIC-1.12□□□□□ -2.59
VPS8Q8N3P4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.12□□□□□ -2.59
VPS8Q8N3P4 AC098679.4-201ENST00000624241 654 ntBASIC-1.12□□□□□ -2.59
VPS8Q8N3P4 RNU6-562P-201ENST00000362731 107 ntBASIC-1.13□□□□□ -2.59
VPS8Q8N3P4 RNU6-652P-201ENST00000365488 107 ntBASIC-1.13□□□□□ -2.59
VPS8Q8N3P4 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.13□□□□□ -2.59
VPS8Q8N3P4 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.13□□□□□ -2.59
VPS8Q8N3P4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.13□□□□□ -2.59
VPS8Q8N3P4 AC078809.1-201ENST00000427601 140 ntBASIC-1.13□□□□□ -2.59
VPS8Q8N3P4 RNA5SP461-201ENST00000516451 104 ntBASIC-1.13□□□□□ -2.59
VPS8Q8N3P4 AC022616.3-201ENST00000523940 148 ntBASIC-1.13□□□□□ -2.59
VPS8Q8N3P4 AC040926.1-201ENST00000530195 238 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms