Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-457P-201ENST00000363999 107 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 Y_RNA.390-201ENST00000383932 102 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 Y_RNA.404-201ENST00000383978 102 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-331P-201ENST00000384724 107 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 MIR10B-201ENST00000385011 110 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-700P-201ENST00000391043 107 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 SNORA75.4-201ENST00000391278 119 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 AC009310.1-201ENST00000414414 451 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 AL353997.1-201ENST00000432936 108 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 Y_RNA.635-201ENST00000459041 101 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 HMGN1P12-201ENST00000499125 195 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 AC116353.2-201ENST00000505332 712 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 AC011406.1-201ENST00000512440 370 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 RNA5SP384-201ENST00000516615 116 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 SUB1P4-201ENST00000566062 339 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 AC022254.1-201ENST00000567857 235 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 MIR5701-3-201ENST00000578890 82 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 MIR5701-1-201ENST00000585138 82 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 MIR5701-2-201ENST00000615634 82 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 AC068205.3-201ENST00000636385 468 ntBASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
C9orf40Q8IXQ3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-222P-201ENST00000362438 107 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 RNY1P16-201ENST00000363063 111 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 Y_RNA.106-201ENST00000363189 100 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-727P-201ENST00000363592 107 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 RNA5SP504-201ENST00000410676 117 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 RNU4-14P-201ENST00000410858 122 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-57P-201ENST00000411348 103 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 USP9YP16-201ENST00000430287 407 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 AC099677.2-201ENST00000436385 175 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 USP9YP23-201ENST00000455085 407 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 AC091179.3-201ENST00000474761 144 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 MIR5695-201ENST00000579717 85 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 MIR4303-201ENST00000581299 66 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 AC005899.2-201ENST00000584353 90 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 ZNF72P-201ENST00000425869 1908 ntBASIC1.44□□□□□ -2.18
C9orf40Q8IXQ3 Y_RNA.179-201ENST00000363844 90 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 SNORD87-201ENST00000364849 89 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-793P-201ENST00000384233 104 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 SNORA67.5-201ENST00000391036 107 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 MIR190B-201ENST00000401119 79 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 MTCYBP10-201ENST00000424905 650 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 RPL23AP50-201ENST00000434149 455 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 HSPE1P21-201ENST00000438283 308 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 AC010409.1-201ENST00000487382 476 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-1114P-201ENST00000516022 107 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 SCARNA16.2-201ENST00000516520 172 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-307P-201ENST00000516743 106 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 AC105029.1-201ENST00000520250 669 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 AL121579.1-201ENST00000555129 305 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 SNORD53B-201ENST00000577887 78 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 AL645939.4-201ENST00000604495 135 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 AC010900.2-201ENST00000604508 210 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 AC069114.2-201ENST00000604699 304 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 AC016727.1-205ENST00000605437 569 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 AL355073.2-201ENST00000612106 557 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 snoZ196.1-201ENST00000625269 89 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 AL669831.3-213ENST00000636676 183 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 MTND5P16-201ENST00000460269 1703 ntBASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.43□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-112P-201ENST00000363599 104 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 RNU1-96P-201ENST00000364163 162 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 RNU4-42P-201ENST00000364738 142 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 RNA5SP363-201ENST00000365072 115 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 Y_RNA.415-201ENST00000384012 112 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-997P-201ENST00000384725 107 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 RNU1-139P-201ENST00000391307 165 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 AL117342.1-201ENST00000404861 406 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 AC093303.1-201ENST00000514549 295 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 SNORA31.17-201ENST00000516953 127 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-1213P-201ENST00000517075 94 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 GNAI2P1-201ENST00000541815 315 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 MZT1P2-201ENST00000604387 248 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 AL353149.1-201ENST00000610667 244 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 AC010999.1-201ENST00000611856 324 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 AC126177.8-201ENST00000618339 1015 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 AC006001.4-201ENST00000622243 395 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms