Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SNORA4.2-201ENST00000365313 147 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 RNU6-95P-201ENST00000384697 107 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 MIR586-201ENST00000385035 97 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 AL590002.1-201ENST00000406554 418 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 MIR320B2-201ENST00000408479 138 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 EIF1P1-201ENST00000421436 341 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 AC074290.1-201ENST00000448883 135 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 PCMTD1P1-201ENST00000455560 355 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 AC015688.6-201ENST00000577737 104 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 AC006001.4-201ENST00000622243 395 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 AC099654.12-201ENST00000639868 649 ntBASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.41-201ENST00000362646 102 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 RNY3P3-201ENST00000363816 102 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 RNU4-75P-201ENST00000364621 146 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 SNORA22-201ENST00000383907 134 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.517-201ENST00000384551 106 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 SNORA22C-201ENST00000384614 134 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 RNU6-331P-201ENST00000384724 107 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 MIR194-1-201ENST00000384892 85 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 MRPL35P1-201ENST00000404272 572 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AL590632.1-201ENST00000424289 371 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 HMGN2P34-201ENST00000437647 269 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AC073910.1-201ENST00000445047 438 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AC079354.2-201ENST00000453523 154 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 MTND1P11-201ENST00000456661 876 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 RNU7-57P-201ENST00000459540 60 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 TRBVA-201ENST00000498804 316 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AC093534.1-201ENST00000504977 132 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 RNU6-506P-201ENST00000516553 94 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 RNU6-314P-201ENST00000516574 104 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AC019176.1-201ENST00000518519 225 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AC245505.1-201ENST00000556398 224 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AF250324.2-201ENST00000608299 610 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 AL138726.1-201ENST00000614873 333 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 MIR1321-201ENST00000637766 79 ntBASIC1.06□□□□□ -2.24
CDKL3Q8IVW4 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 RNU1-22P-201ENST00000363334 158 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 SNORA67.2-201ENST00000384300 149 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.530-201ENST00000384587 101 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 RNU6-332P-201ENST00000391193 108 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 RNA5SP504-201ENST00000410676 117 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 RNU6-57P-201ENST00000411348 103 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 AC016909.1-201ENST00000415916 166 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 DLGAP5P1-201ENST00000430307 464 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 Z82188.1-201ENST00000436709 154 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 MTCO3P18-201ENST00000440206 761 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 AL606517.2-201ENST00000442855 241 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 snoU13.27-201ENST00000459278 104 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 MTCO2P30-201ENST00000503662 364 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 RNU6-344P-201ENST00000516635 111 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 RNU1-117P-201ENST00000517041 158 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 MIR4452-201ENST00000583004 71 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 POLR3GP2-201ENST00000588366 668 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 AL078596.1-201ENST00000624856 447 ntBASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 RNU6-1090P-201ENST00000364065 94 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 RNU4-24P-201ENST00000364565 139 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 SNORA72.2-201ENST00000365028 127 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 RNU6-417P-201ENST00000384712 107 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 MIR32-201ENST00000384965 70 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 MIR517A-201ENST00000385001 87 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 DYNLT3P2-201ENST00000442517 295 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 RNU7-66P-201ENST00000459469 62 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 RNU6-256P-201ENST00000516747 97 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 RNA5SP54-201ENST00000516951 92 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 AC006504.8-201ENST00000621046 635 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 AC008873.1-201ENST00000625051 138 ntBASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
CDKL3Q8IVW4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 RNU4-9P-201ENST00000364951 139 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 SNORA12.1-201ENST00000390873 148 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 MIR1253-201ENST00000408273 105 ntBASIC1.03□□□□□ -2.24
CDKL3Q8IVW4 COX6CP10-201ENST00000416832 224 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms