Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 RNU6-1146P-201ENST00000516282 102 ntBASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 SNORA25.14-201ENST00000516481 132 ntBASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 SNORA31.10-201ENST00000516482 106 ntBASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 RNU6-314P-201ENST00000516574 104 ntBASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 MIR4524B-201ENST00000581569 115 ntBASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 AC009033.1-201ENST00000624279 431 ntBASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 AC024614.3-201ENST00000637860 256 ntBASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 MTND4P12-201ENST00000498999 1377 ntBASIC1.19□□□□□ -2.22
CCDC50Q8IVM0 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 RNU6-873P-201ENST00000363833 107 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 Y_RNA.194-201ENST00000363985 102 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 Y_RNA.212-201ENST00000364177 102 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 RNU4-9P-201ENST00000364951 139 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 SNORA72.2-201ENST00000365028 127 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 Y_RNA.415-201ENST00000384012 112 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 MIR320B2-201ENST00000408479 138 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 AP1B1P2-201ENST00000416196 106 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 RPS26P45-201ENST00000471748 340 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 SUMO2P16-201ENST00000519475 264 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 AC027288.2-201ENST00000553028 243 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 AC245505.1-201ENST00000556398 224 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 FRG2DP-202ENST00000566967 323 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 MIR3942-201ENST00000585264 109 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 AC022217.4-201ENST00000604389 163 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 AC103810.9-201ENST00000606688 112 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 SNORD11B-201ENST00000607707 90 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 MIR1321-201ENST00000637766 79 ntBASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CCDC50Q8IVM0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 Y_RNA.135-201ENST00000363439 95 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 SNORD115-8-201ENST00000363856 82 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 SNORD115-38-201ENST00000365037 82 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 Y_RNA.319-201ENST00000365138 92 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 RNU6-1240P-201ENST00000365155 104 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 RNA5SP259-201ENST00000365541 109 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 EIF1P1-201ENST00000421436 341 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 AC074290.1-201ENST00000448883 135 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 AL133373.1-201ENST00000497098 94 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 RNU6-506P-201ENST00000516553 94 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 RNU6-273P-201ENST00000516937 96 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 RNA5SP54-201ENST00000516951 92 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 AC019193.3-201ENST00000609144 554 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 AC021506.2-201ENST00000612354 169 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 AC009248.2-201ENST00000619826 254 ntBASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CCDC50Q8IVM0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 Y_RNA.100-201ENST00000363141 102 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 Y_RNA.530-201ENST00000384587 101 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 RNU6-1186P-201ENST00000410429 97 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 AC091179.3-201ENST00000474761 144 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 RPL30P7-201ENST00000479312 323 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 RNU7-128P-201ENST00000517247 62 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 AL512310.8-201ENST00000550183 120 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 AC024909.2-201ENST00000553035 286 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 MIR4298-201ENST00000584380 73 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 AC040896.1-201ENST00000613819 479 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 AC048344.4-201ENST00000619744 527 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 AC090617.10-201ENST00000624308 134 ntBASIC1.16□□□□□ -2.22
CCDC50Q8IVM0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CCDC50Q8IVM0 SNORD33-201ENST00000362761 85 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 SNORD115-32-201ENST00000364079 82 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 Y_RNA.414-201ENST00000384011 101 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 RNU6-245P-201ENST00000384020 107 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 MIR515-2-201ENST00000384883 83 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 MIR515-1-201ENST00000384884 83 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 MIR1185-2-201ENST00000408687 86 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 AC016907.1-201ENST00000419483 435 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 AC093534.1-201ENST00000504977 132 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 RNU1-142P-201ENST00000516682 145 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 MZT1P2-201ENST00000604387 248 ntBASIC1.15□□□□□ -2.23
CCDC50Q8IVM0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 SNORD116-11-201ENST00000383882 92 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 Y_RNA.533-201ENST00000384596 114 ntBASIC1.14□□□□□ -2.23
CCDC50Q8IVM0 MIR153-2-201ENST00000385225 87 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms