Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CYP3A52P-201ENST00000563326 91 ntBASIC1.13□□□□□ -2.23
NUDCD3Q8IVD9 TPRKBP2-201ENST00000565969 475 ntBASIC1.13□□□□□ -2.23
NUDCD3Q8IVD9 MIR3672-201ENST00000584290 82 ntBASIC1.13□□□□□ -2.23
NUDCD3Q8IVD9 AL929325.1-201ENST00000603096 117 ntBASIC1.13□□□□□ -2.23
NUDCD3Q8IVD9 U6.108-201ENST00000637764 58 ntBASIC1.13□□□□□ -2.23
NUDCD3Q8IVD9 MIR378A-201ENST00000362177 66 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 RNA5SP327-201ENST00000362494 101 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 Y_RNA.41-201ENST00000362646 102 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 RNU6-1090P-201ENST00000364065 94 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 RNU4-75P-201ENST00000364621 146 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 Y_RNA.319-201ENST00000365138 92 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 RNU6-1240P-201ENST00000365155 104 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 RNU6-332P-201ENST00000391193 108 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AC010154.1-201ENST00000425857 269 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AC005002.2-201ENST00000438228 269 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 RNU7-95P-201ENST00000459222 64 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AK6P2-201ENST00000549020 471 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AC027288.2-201ENST00000553028 243 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AC024909.2-201ENST00000553035 286 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AF250324.2-201ENST00000608299 610 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AC040896.1-201ENST00000613819 479 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AL157834.3-201ENST00000615543 103 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 AL359757.2-201ENST00000624309 274 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 MIR1321-201ENST00000637766 79 ntBASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
NUDCD3Q8IVD9 MTND4P12-201ENST00000498999 1377 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 Y_RNA.135-201ENST00000363439 95 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 RNU6-873P-201ENST00000363833 107 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 Y_RNA.194-201ENST00000363985 102 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 RNA5SP259-201ENST00000365541 109 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 MIR153-2-201ENST00000385225 87 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 ZNF885P-201ENST00000420174 1098 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 SNX2P2-201ENST00000424553 323 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 MTND2P22-201ENST00000444325 1033 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 RPL30P10-201ENST00000488148 337 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 ACA59.1-201ENST00000515966 143 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 SNORA31.10-201ENST00000516482 106 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 RNU6-314P-201ENST00000516574 104 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 RNU1-142P-201ENST00000516682 145 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 AL512310.8-201ENST00000550183 120 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 AC021506.2-201ENST00000612354 169 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 AC009033.1-201ENST00000624279 431 ntBASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
NUDCD3Q8IVD9 RNU6-727P-201ENST00000363592 107 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 Y_RNA.212-201ENST00000364177 102 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 BTF3P4-201ENST00000418852 495 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 RNU6-506P-201ENST00000516553 94 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 RNU6-1198P-201ENST00000516904 67 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 AC245505.1-201ENST00000556398 224 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 AP000942.3-201ENST00000603702 160 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 AC022217.4-201ENST00000604389 163 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 AC019193.3-201ENST00000609144 554 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 AL359075.3-201ENST00000613288 217 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 AC048344.4-201ENST00000619744 527 ntBASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.1□□□□□ -2.23
NUDCD3Q8IVD9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 Y_RNA.414-201ENST00000384011 101 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 Y_RNA.415-201ENST00000384012 112 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 Y_RNA.517-201ENST00000384551 106 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AL356776.1-201ENST00000406574 447 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 MIR1185-2-201ENST00000408687 86 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 RPL30P16-201ENST00000419341 429 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 MTCO2P7-201ENST00000446518 666 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AC091179.3-201ENST00000474761 144 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 RNA5SP458-201ENST00000516188 119 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 SUMO2P16-201ENST00000519475 264 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 UBL5P4-201ENST00000562584 236 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 MIR4769-201ENST00000584126 77 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 MZT1P2-201ENST00000604387 248 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AC124303.1-201ENST00000605703 360 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AC009248.2-201ENST00000619826 254 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AL353770.2-201ENST00000620024 78 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 AC024614.3-201ENST00000637860 256 ntBASIC1.09□□□□□ -2.23
NUDCD3Q8IVD9 U3.8-201ENST00000363675 217 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 SNORD116-11-201ENST00000383882 92 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
NUDCD3Q8IVD9 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms