Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 U2.14-201ENST00000615943 113 ntBASIC3.04□□□□□ -1.92
DDX53Q86TM3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
DDX53Q86TM3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
DDX53Q86TM3 SNORA25.1-201ENST00000362326 128 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 Y_RNA.20-201ENST00000362479 113 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 RNU6-743P-201ENST00000364151 106 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 Y_RNA.257-201ENST00000364596 102 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 Y_RNA.418-201ENST00000384029 102 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 MIR9-1-201ENST00000385198 89 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 MIR300-201ENST00000401138 83 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 NDUFB4P10-201ENST00000452541 359 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 RN7SL633P-201ENST00000488974 297 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 SNORA48.11-201ENST00000517015 89 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 RNU2-12P-201ENST00000517216 168 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX53Q86TM3 AC022616.8-201ENST00000533569 253 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX53Q86TM3 MIR3616-201ENST00000584070 92 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 MIR4753-201ENST00000585119 83 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX53Q86TM3 AC006380.1-201ENST00000603598 186 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.03□□□□□ -1.92
DDX53Q86TM3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.03□□□□□ -1.92
DDX53Q86TM3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.03□□□□□ -1.92
DDX53Q86TM3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX53Q86TM3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
DDX53Q86TM3 RNA5SP125-201ENST00000364843 120 ntBASIC3.02□□□□□ -1.93
DDX53Q86TM3 Y_RNA.539-201ENST00000384635 107 ntBASIC3.02□□□□□ -1.93
DDX53Q86TM3 MIR627-201ENST00000384979 97 ntBASIC3.02□□□□□ -1.93
DDX53Q86TM3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.02□□□□□ -1.93
DDX53Q86TM3 RNU2-52P-201ENST00000410680 190 ntBASIC3.02□□□□□ -1.93
DDX53Q86TM3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.02□□□□□ -1.93
DDX53Q86TM3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX53Q86TM3 SNORA31.26-201ENST00000517250 137 ntBASIC3.02□□□□□ -1.93
DDX53Q86TM3 MIR3145-201ENST00000580727 82 ntBASIC3.02□□□□□ -1.93
DDX53Q86TM3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX53Q86TM3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX53Q86TM3 AC093831.2-201ENST00000624393 3427 ntBASIC3.02□□□□□ -1.93
DDX53Q86TM3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DDX53Q86TM3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.01□□□□□ -1.93
DDX53Q86TM3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
DDX53Q86TM3 SNORD31B-201ENST00000364977 69 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 RNU6-514P-201ENST00000384208 107 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 MIR196B-201ENST00000384852 84 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 RNU6-907P-201ENST00000390924 102 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 AL138827.1-201ENST00000402666 306 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 AC003685.2-201ENST00000422795 395 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 MTCO1P5-201ENST00000433573 344 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 AL445687.1-201ENST00000439946 251 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 Z96811.1-201ENST00000445880 108 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 HMGN2P18-201ENST00000450680 270 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 AL139109.1-201ENST00000455491 297 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 SRIP1-201ENST00000489235 288 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.01□□□□□ -1.93
DDX53Q86TM3 RPL21P9-201ENST00000556149 474 ntBASIC3.01□□□□□ -1.93
DDX53Q86TM3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
DDX53Q86TM3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
DDX53Q86TM3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.01□□□□□ -1.93
DDX53Q86TM3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3□□□□□ -1.93
DDX53Q86TM3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
DDX53Q86TM3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
DDX53Q86TM3 Y_RNA.44-201ENST00000362676 108 ntBASIC3□□□□□ -1.93
DDX53Q86TM3 Y_RNA.136-201ENST00000363444 102 ntBASIC3□□□□□ -1.93
DDX53Q86TM3 RNU6-438P-201ENST00000365561 103 ntBASIC3□□□□□ -1.93
DDX53Q86TM3 RNU6-338P-201ENST00000383888 105 ntBASIC3□□□□□ -1.93
DDX53Q86TM3 AC104332.2-201ENST00000429959 156 ntBASIC3□□□□□ -1.93
DDX53Q86TM3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3□□□□□ -1.93
DDX53Q86TM3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3□□□□□ -1.93
DDX53Q86TM3 RNA5SP490-201ENST00000517141 136 ntBASIC3□□□□□ -1.93
DDX53Q86TM3 AC141273.2-201ENST00000618989 130 ntBASIC3□□□□□ -1.93
DDX53Q86TM3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3□□□□□ -1.93
DDX53Q86TM3 MAPK10-266ENST00000641066 6555 ntBASIC3□□□□□ -1.93
DDX53Q86TM3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
DDX53Q86TM3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
DDX53Q86TM3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3□□□□□ -1.93
DDX53Q86TM3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
DDX53Q86TM3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
DDX53Q86TM3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 RNU6-859P-201ENST00000362728 107 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 Y_RNA.65-201ENST00000362846 100 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 RNU6-324P-201ENST00000363957 106 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 RNU1-112P-201ENST00000364401 164 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
DDX53Q86TM3 U3.40-201ENST00000408706 208 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 RNA5SP21-201ENST00000410917 96 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
DDX53Q86TM3 RNU7-57P-201ENST00000459540 60 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 AC114982.1-201ENST00000469402 321 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 AC091959.1-201ENST00000495857 238 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX53Q86TM3 RNU6-56P-201ENST00000516986 93 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.99□□□□□ -1.93
DDX53Q86TM3 PRELID2P1-201ENST00000552837 301 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX53Q86TM3 MIR4643-201ENST00000577473 78 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 MIR4435-1-201ENST00000582552 80 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 MIR4506-201ENST00000584693 77 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 DEFB117-201ENST00000602356 141 ntBASIC2.99□□□□□ -1.93
DDX53Q86TM3 BX284668.6-201ENST00000606899 438 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms