Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.91□□□□□ -2.1
NPHP3Q7Z494 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
NPHP3Q7Z494 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 AC005296.1-201ENST00000616145 209 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 MTND4P12-201ENST00000498999 1377 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.99-201ENST00000363138 105 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.474-201ENST00000384341 102 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 SNORA8-201ENST00000384574 139 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
NPHP3Q7Z494 SNORA12.2-201ENST00000391040 156 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.91□□□□□ -2.1
NPHP3Q7Z494 MTCO3P29-201ENST00000432119 779 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 AL035666.1-201ENST00000446195 348 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.91□□□□□ -2.1
NPHP3Q7Z494 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 RNU6-875P-201ENST00000516488 106 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 RNU5F-4P-201ENST00000516581 114 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.708-201ENST00000516950 96 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 AC084364.2-201ENST00000546924 395 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 AP001094.1-201ENST00000579805 193 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 MIR3660-201ENST00000584845 100 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 MIR6515-201ENST00000619843 57 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 PVT1_3.1-201ENST00000620853 95 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
NPHP3Q7Z494 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
NPHP3Q7Z494 RNU6-593P-201ENST00000364716 112 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 RNU4-9P-201ENST00000364951 139 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 RNA5SP363-201ENST00000365072 115 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.9□□□□□ -2.11
NPHP3Q7Z494 SNORA75.4-201ENST00000391278 119 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 RPS26P42-201ENST00000413485 326 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.9□□□□□ -2.11
NPHP3Q7Z494 snoU13.30-201ENST00000458951 104 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 RNU7-14P-201ENST00000459331 62 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.9□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.675-201ENST00000516389 149 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 AL137100.2-201ENST00000555786 315 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.9□□□□□ -2.11
NPHP3Q7Z494 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.9□□□□□ -2.11
NPHP3Q7Z494 CYP2C61P-201ENST00000604072 290 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 AC092794.2-201ENST00000620933 563 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 AC099654.5-201ENST00000636479 350 ntBASIC1.9□□□□□ -2.11
NPHP3Q7Z494 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NPHP3Q7Z494 ZNF299P-201ENST00000406845 1804 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 RNU6-595P-201ENST00000363944 107 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.405-201ENST00000383979 100 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.451-201ENST00000384200 100 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.524-201ENST00000384564 100 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.561-201ENST00000384694 100 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NPHP3Q7Z494 RNU6-370P-201ENST00000411008 104 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 AC004866.1-201ENST00000411748 78 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.89□□□□□ -2.11
NPHP3Q7Z494 SNRPEP8-201ENST00000442866 260 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 MTND4P18-201ENST00000447010 465 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 MTCO3P8-201ENST00000453691 755 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 SCARNA16.2-201ENST00000516520 172 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.89□□□□□ -2.11
NPHP3Q7Z494 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.89□□□□□ -2.11
NPHP3Q7Z494 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.89□□□□□ -2.11
NPHP3Q7Z494 AC005014.2-201ENST00000607795 599 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 AC104260.1-201ENST00000616660 539 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 PISRT1.1-201ENST00000616930 107 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.89□□□□□ -2.11
NPHP3Q7Z494 ZNF204P-201ENST00000416749 2397 ntBASIC1.89□□□□□ -2.11
NPHP3Q7Z494 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
NPHP3Q7Z494 RNU6-23P-201ENST00000363283 107 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 RNU6-160P-201ENST00000384591 107 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 RNA5SP501-201ENST00000410990 112 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 AL353997.1-201ENST00000432936 108 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 MTATP6P23-201ENST00000440153 476 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 AC004386.2-201ENST00000441858 148 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 SNRPGP13-201ENST00000442212 177 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 MTND5P20-201ENST00000448677 143 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 Y_RNA.635-201ENST00000459041 101 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 AC007215.1-201ENST00000464893 276 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 AC004223.1-201ENST00000479840 271 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 RPS23P5-201ENST00000495419 428 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 RNU6-120P-201ENST00000516077 103 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.88□□□□□ -2.11
NPHP3Q7Z494 AC080078.3-201ENST00000605407 463 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.88□□□□□ -2.11
NPHP3Q7Z494 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 AC005562.2-201ENST00000618264 111 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 U1.36-201ENST00000620684 176 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 AC130454.1-201ENST00000622948 401 ntBASIC1.88□□□□□ -2.11
NPHP3Q7Z494 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
NPHP3Q7Z494 RNU6-545P-201ENST00000362681 104 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 RNU1-76P-201ENST00000362903 159 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 RNA5SP212-201ENST00000391223 107 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 RNU6-277P-201ENST00000516272 106 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 AL590705.4-201ENST00000532209 134 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 APOOP3-201ENST00000536787 586 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.87□□□□□ -2.11
NPHP3Q7Z494 MIR5006-201ENST00000583027 110 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 AL355802.3-201ENST00000607571 545 ntBASIC1.87□□□□□ -2.11
NPHP3Q7Z494 AL132765.2-201ENST00000610812 351 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms