Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RNU6-1153P-201ENST00000516760 105 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 MIR5188-201ENST00000583467 113 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 AC116312.1-201ENST00000606841 314 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 AC007485.1-201ENST00000616755 206 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 AC068205.3-201ENST00000636385 468 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 AP000553.5-201ENST00000641933 54 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 Y_RNA.27-201ENST00000362540 103 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 RNA5SP361-201ENST00000362686 118 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 RNY3P11-201ENST00000364153 102 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 SNORA22B-201ENST00000383876 138 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 MIR1262-201ENST00000408276 93 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 AC123900.1-201ENST00000420390 96 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 AL445646.1-201ENST00000431784 216 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 AL163540.1-201ENST00000485382 386 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.37□□□□□ -2.03
SYNE3Q6ZMZ3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 AL359851.1-201ENST00000569460 4997 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 MIR410-201ENST00000362222 80 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 AC117470.1-201ENST00000381974 330 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 SNORD14D-201ENST00000384390 87 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 MIR17-201ENST00000385012 84 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 RNU6-308P-201ENST00000390957 107 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 Y_RNA.605-201ENST00000410577 105 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 AL445305.1-201ENST00000432577 575 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 MTCO1P44-201ENST00000441935 243 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 RNA5SP233-201ENST00000459153 113 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 SNORA25.10-201ENST00000515926 124 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 RNU6-991P-201ENST00000516168 107 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 RNU2-34P-201ENST00000516534 121 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 AK6P2-201ENST00000549020 471 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 RRN3P3-201ENST00000549207 578 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 AC006600.1-201ENST00000572529 153 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 AC026271.5-201ENST00000577873 130 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 MZT1P2-201ENST00000604387 248 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 AC006157.1-201ENST00000611750 366 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 MTND5P35-201ENST00000557537 1720 ntBASIC2.36□□□□□ -2.03
SYNE3Q6ZMZ3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 MTND4P1-201ENST00000457501 1466 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 MRPL35P1-201ENST00000404272 572 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 AL139156.1-201ENST00000412785 841 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 MTCO3P19-201ENST00000415864 321 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 RPS29P21-201ENST00000496272 170 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 AC074133.1-201ENST00000515696 183 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 RNU6-1012P-201ENST00000516606 109 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 AC022868.1-201ENST00000517767 391 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 RNU6-988P-201ENST00000519081 107 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 ANP32BP3-201ENST00000559213 706 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 AC083806.3-201ENST00000614016 455 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 AC005592.1-201ENST00000566527 1640 ntBASIC2.35□□□□□ -2.03
SYNE3Q6ZMZ3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 CENPCP1-201ENST00000533085 2578 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 Y_RNA.132-201ENST00000363421 102 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 RNU6-975P-201ENST00000384296 105 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 RNU6-1011P-201ENST00000384668 107 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 MIR29C-201ENST00000385231 88 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 AL160004.2-201ENST00000432935 350 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 AC010095.1-201ENST00000443543 144 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 AL357134.1-201ENST00000445848 426 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 RNU1-131P-201ENST00000458943 161 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 RNU7-169P-201ENST00000459456 61 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 AC010531.2-201ENST00000465012 153 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 AC067942.3-201ENST00000512025 362 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 MIR4448-201ENST00000584360 86 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 AL357075.2-201ENST00000614906 189 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 AC010205.1-201ENST00000616668 449 ntBASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SYNE3Q6ZMZ3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 AC092881.1-201ENST00000638218 2733 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-545P-201ENST00000362681 104 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 U3.8-201ENST00000363675 217 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-743P-201ENST00000364151 106 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-879P-201ENST00000364328 108 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.326-201ENST00000365176 113 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-1026P-201ENST00000384465 108 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 MIR628-201ENST00000385229 95 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.645-201ENST00000391229 102 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 OOSP1P1-201ENST00000423265 274 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 SDAD1P3-201ENST00000427380 333 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms