Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 U2.12-201ENST00000613778 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 U2.9-201ENST00000615427 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 U2.11-201ENST00000616345 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 U2.2-201ENST00000616535 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 U2.3-201ENST00000617785 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 U2.19-201ENST00000618602 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RNU2-1-201ENST00000618664 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 U2.6-201ENST00000619225 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 U2.5-201ENST00000619465 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 U2.10-201ENST00000620268 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 AL365361.1-201ENST00000566942 3481 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 MAPK10-266ENST00000641066 6555 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.121-201ENST00000363309 113 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.172-201ENST00000363765 102 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 RNU6-283P-201ENST00000364788 107 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 RNU6-187P-201ENST00000384139 106 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 U3.39-201ENST00000408569 239 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 RNU2-63P-201ENST00000410792 194 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 RPL23AP58-201ENST00000440453 469 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 RPS20P10-201ENST00000451209 253 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 RPS26P55-201ENST00000471178 356 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 RNU2-34P-201ENST00000516534 121 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 AC025647.1-201ENST00000517879 253 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 AC090115.4-201ENST00000609970 188 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 AC013412.1-201ENST00000610687 192 ntBASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SNAP47Q5SQN1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 RNU6-743P-201ENST00000364151 106 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 RNU4-10P-201ENST00000364383 140 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.412-201ENST00000384001 104 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.441-201ENST00000384123 112 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 RNU6-804P-201ENST00000384286 107 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 RNU6-220P-201ENST00000390919 107 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 RNU6-394P-201ENST00000410735 107 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 RNU5E-9P-201ENST00000411164 104 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 Z92545.1-201ENST00000411782 234 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 AC008134.1-201ENST00000420943 193 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 RN7SL807P-201ENST00000470923 297 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 FCF1P8-201ENST00000510322 597 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 RNU6-1337P-201ENST00000516525 95 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 MIR3144-201ENST00000579460 79 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 MIR4276-201ENST00000584832 70 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 AC104465.1-201ENST00000611365 139 ntBASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNAP47Q5SQN1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 RNU6-461P-201ENST00000364195 107 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 RNA5SP42-201ENST00000364278 115 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 RNU6-407P-201ENST00000365280 104 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 SNORA8.3-201ENST00000384679 139 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 RNU6-1135P-201ENST00000411083 103 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 AC016909.1-201ENST00000415916 166 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 AC010531.2-201ENST00000465012 153 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 RN7SKP164-201ENST00000516138 266 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 RNU6-789P-201ENST00000517105 102 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 AC021269.2-201ENST00000532318 330 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.802-201ENST00000614892 130 ntBASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SNAP47Q5SQN1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.75-201ENST00000362927 97 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 RNU6-1205P-201ENST00000363625 106 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.182-201ENST00000363880 111 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 SNORD116-13-201ENST00000384408 92 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 MIR626-201ENST00000385032 94 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 SNORA48.2-201ENST00000390926 124 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 HSPE1P21-201ENST00000438283 308 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 AL137159.1-201ENST00000452808 512 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 RN7SL594P-201ENST00000470590 287 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 RPS27AP9-201ENST00000477681 438 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 AC027419.1-201ENST00000522976 328 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 AC108706.1-201ENST00000611053 297 ntBASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SNAP47Q5SQN1 RNY1P5-201ENST00000383890 115 ntBASIC3.27□□□□□ -1.89
SNAP47Q5SQN1 MIR128-1-201ENST00000384921 82 ntBASIC3.27□□□□□ -1.89
SNAP47Q5SQN1 MIR526A2-201ENST00000390198 65 ntBASIC3.27□□□□□ -1.89
SNAP47Q5SQN1 RNU2-48P-201ENST00000410694 191 ntBASIC3.27□□□□□ -1.89
SNAP47Q5SQN1 EEF1B2P7-201ENST00000451177 676 ntBASIC3.27□□□□□ -1.89
SNAP47Q5SQN1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms