Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SNORD115-1-201ENST00000364961 82 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 SNORA1.3-201ENST00000384676 136 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 MIR548D2-201ENST00000384955 97 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 SNORA3C-201ENST00000408792 125 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 MIR1183-201ENST00000408856 89 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 RNA5SP511-201ENST00000410487 115 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 RPS29P4-201ENST00000414733 161 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 RPL27AP5-201ENST00000469428 449 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 RN7SL807P-201ENST00000470923 297 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 AC106707.2-201ENST00000484182 374 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 RPS27AP10-201ENST00000496103 208 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 RNU6-795P-201ENST00000516323 103 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 MIR2114-201ENST00000516645 80 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 ACA59.2-201ENST00000517061 156 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 U3.45-201ENST00000607547 219 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 AC073308.1-201ENST00000623696 305 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 AL159152.1-201ENST00000635019 2587 ntBASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTC1Q2NKJ3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 RNU1-89P-201ENST00000384592 164 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 RNVU1-14-201ENST00000384770 164 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 AL451046.2-201ENST00000403074 277 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 AC245291.1-201ENST00000419501 328 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 AL133162.1-201ENST00000463228 453 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 RPS29P20-201ENST00000489592 171 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 OR9P1P-201ENST00000496431 281 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 SCARNA15-202ENST00000516881 127 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 SCARNA14-201ENST00000516903 136 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 RNA5SP179-201ENST00000517284 121 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 AC025627.2-201ENST00000576220 160 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 MIR3922-201ENST00000585192 84 ntBASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTC1Q2NKJ3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 RNU6-1209P-201ENST00000363655 107 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 Y_RNA.796-201ENST00000364268 102 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 Y_RNA.799-201ENST00000364992 102 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 RNU6-816P-201ENST00000390914 107 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 RNU6-1268P-201ENST00000391214 107 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 RNU6-1239P-201ENST00000391310 107 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 AL133475.1-201ENST00000404414 305 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 HMGN2P10-201ENST00000448085 265 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 RPL29P14-201ENST00000495837 428 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 AC145146.1-201ENST00000496370 254 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 RNU6-1270P-201ENST00000517128 108 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 HIGD1AP1-201ENST00000550979 275 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 MIR4662B-201ENST00000579498 81 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 AC091167.4-201ENST00000605079 184 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 AC005000.2-201ENST00000605468 310 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 AC012531.4-201ENST00000616509 177 ntBASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CTC1Q2NKJ3 LINC02471-203ENST00000641941 4752 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 RNU6-271P-201ENST00000363858 105 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 RNU6-1138P-201ENST00000365359 106 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 RNU6-652P-201ENST00000365488 107 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 RNU6-1292P-201ENST00000383856 107 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 MIR562-201ENST00000384894 95 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 AL139095.1-201ENST00000404326 391 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 Y_RNA.601-201ENST00000410500 113 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 CYCSP48-201ENST00000417124 323 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 AL035423.1-201ENST00000420331 213 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 AC093663.1-201ENST00000497190 394 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 RNU6-928P-201ENST00000516876 104 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 SUMO2P16-201ENST00000519475 264 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 MIR2681-201ENST00000581814 105 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 MIR3609-201ENST00000582661 80 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 MIR3199-2-201ENST00000636243 86 ntBASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CTC1Q2NKJ3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms