| NDUFA9 | Q16795 | RNU6-596P-201 | ENST00000365395 | 98 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | ZNF468-202 | ENST00000396409 | 384 nt | TSL 5 BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MIR1253-201 | ENST00000408273 | 105 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | BTF3P4-201 | ENST00000418852 | 495 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | LINC01701-201 | ENST00000419614 | 451 nt | TSL 2 BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | USP9YP30-201 | ENST00000430729 | 455 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MTND1P34-201 | ENST00000438556 | 671 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC069257.2-201 | ENST00000441819 | 155 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC073910.1-201 | ENST00000445047 | 438 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MTND1P17-201 | ENST00000448961 | 204 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Z68323.1-201 | ENST00000450365 | 519 nt | TSL 3 BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU7-95P-201 | ENST00000459222 | 64 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC011352.1-201 | ENST00000512300 | 793 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU4-49P-201 | ENST00000516080 | 140 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU1-54P-201 | ENST00000517181 | 120 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC022690.2-201 | ENST00000525673 | 589 nt | TSL 3 BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC112481.1-201 | ENST00000549669 | 901 nt | TSL 2 BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | UBL5P4-201 | ENST00000562584 | 236 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MIR7974-201 | ENST00000615835 | 79 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC009248.2-201 | ENST00000619826 | 254 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC095038.3-201 | ENST00000634439 | 195 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC073869.6-201 | ENST00000640656 | 341 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC100821.1-201 | ENST00000523153 | 2479 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MTND4P12-201 | ENST00000498999 | 1377 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | HIF1A-212 | ENST00000557538 | 3468 nt | TSL 1 (best) BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AL161722.3-201 | ENST00000605789 | 2983 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AGR3-201 | ENST00000310398 | 749 nt | APPRIS P1 TSL 1 (best) BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU1-62P-201 | ENST00000362599 | 164 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6-727P-201 | ENST00000363592 | 107 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6-203P-201 | ENST00000384038 | 104 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6-159P-201 | ENST00000391080 | 106 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | SNAP23-203 | ENST00000397138 | 477 nt | TSL 1 (best) BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC016909.1-201 | ENST00000415916 | 166 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AP1B1P2-201 | ENST00000416196 | 106 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | FTH1P12-201 | ENST00000432137 | 551 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | LINC01691-201 | ENST00000450546 | 426 nt | TSL 5 BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | HSPE1P24-201 | ENST00000450782 | 238 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6-221P-201 | ENST00000459541 | 99 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC025647.1-201 | ENST00000517879 | 253 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | SUB1P3-201 | ENST00000564581 | 315 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MTND5P10-201 | ENST00000603719 | 1809 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Y_RNA.67-201 | ENST00000362870 | 100 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6-271P-201 | ENST00000363858 | 105 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | SNORA72.2-201 | ENST00000365028 | 127 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Y_RNA.405-201 | ENST00000383979 | 100 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Y_RNA.451-201 | ENST00000384200 | 100 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Y_RNA.524-201 | ENST00000384564 | 100 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Y_RNA.561-201 | ENST00000384694 | 100 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNA5SP467-201 | ENST00000391274 | 118 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MIR1277-201 | ENST00000408536 | 78 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AL136985.1-201 | ENST00000424592 | 395 nt | TSL 3 BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | LINC01032-201 | ENST00000451690 | 276 nt | TSL 5 BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RPS29P23-201 | ENST00000458635 | 123 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC069528.1-201 | ENST00000490344 | 705 nt | TSL 3 BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU7-175P-201 | ENST00000515915 | 61 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Y_RNA.682-201 | ENST00000516457 | 100 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | ZNF436-AS1-205 | ENST00000518600 | 376 nt | TSL 5 BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC087518.1-201 | ENST00000524098 | 187 nt | TSL 3 BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AP003097.2-201 | ENST00000530126 | 178 nt | TSL 3 BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AL590705.4-201 | ENST00000532209 | 134 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MIR4790-201 | ENST00000577799 | 79 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MIR4421-201 | ENST00000578133 | 69 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC018638.8-201 | ENST00000588755 | 281 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC007014.2-201 | ENST00000615581 | 479 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC002553.4-201 | ENST00000616896 | 331 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC138058.1-201 | ENST00000620572 | 449 nt | TSL 3 BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | ZNF299P-201 | ENST00000406845 | 1804 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | BRCA1-202 | ENST00000354071 | 4497 nt | TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | DEUP1-202 | ENST00000525646 | 1920 nt | TSL 1 (best) BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Y_RNA.48-201 | ENST00000362710 | 103 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | SNORA7.1-201 | ENST00000363750 | 139 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6-595P-201 | ENST00000363944 | 107 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6-280P-201 | ENST00000364145 | 104 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6-1240P-201 | ENST00000365155 | 104 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | SNORA4.2-201 | ENST00000365313 | 147 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Y_RNA.415-201 | ENST00000384012 | 112 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6-842P-201 | ENST00000384269 | 107 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MIR515-2-201 | ENST00000384883 | 83 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MIR515-1-201 | ENST00000384884 | 83 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6ATAC2P-201 | ENST00000387943 | 126 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU1-78P-201 | ENST00000391248 | 165 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | FGF7P8-201 | ENST00000402994 | 292 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC008134.1-201 | ENST00000420943 | 193 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AL139396.1-201 | ENST00000421137 | 167 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | SNORD5.1-201 | ENST00000458800 | 75 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | snoU13.27-201 | ENST00000459278 | 104 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Y_RNA.638-201 | ENST00000459374 | 113 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | RNU6-329P-201 | ENST00000459618 | 107 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC091179.3-201 | ENST00000474761 | 144 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AL163540.1-201 | ENST00000485382 | 386 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC103851.1-201 | ENST00000506833 | 274 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AC134698.4-201 | ENST00000523451 | 826 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | CARD18-203 | ENST00000532895 | 422 nt | TSL 2 BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | AK6P2-201 | ENST00000549020 | 471 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MIR4422-201 | ENST00000581938 | 83 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | MIR8063-201 | ENST00000621930 | 81 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | ICE2P2-201 | ENST00000483823 | 2787 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | BRDT-206 | ENST00000402388 | 3125 nt | APPRIS P3 TSL 1 (best) BASIC | 1.29 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | OR4C11-202 | ENST00000641580 | 2737 nt | APPRIS P1 BASIC | 1.29 | □□□□□ -2.2 | | |
| NDUFA9 | Q16795 | Y_RNA.86-201 | ENST00000363020 | 111 nt | BASIC | 1.29 | □□□□□ -2.2 | | |