Protein–RNA interactions for Protein: Q08ER8

ZNF543, Zinc finger protein 543, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543Q08ER8 SNORA40.9-201ENST00000515895 93 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.713-201ENST00000517013 96 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 AC087441.2-201ENST00000529141 262 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 AC040926.1-201ENST00000530195 238 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 AP003072.1-201ENST00000531740 145 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.812-201ENST00000610788 101 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.784-201ENST00000613803 101 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.787-201ENST00000616522 101 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.780-201ENST00000617336 101 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.801-201ENST00000619005 101 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 MIR6132-201ENST00000622083 109 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.52□□□□□ -2.01
ZNF543Q08ER8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
ZNF543Q08ER8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF543Q08ER8 SNORA63.7-201ENST00000365579 123 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 SNORA67.3-201ENST00000384366 140 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 MIR524-201ENST00000385242 87 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 SNORA11.4-201ENST00000408823 129 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 AL121890.1-201ENST00000435457 205 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 AL357134.1-201ENST00000445848 426 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.51□□□□□ -2.01
ZNF543Q08ER8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.51□□□□□ -2.01
ZNF543Q08ER8 AC067942.3-201ENST00000512025 362 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 RNU6-1012P-201ENST00000516606 109 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 AC022616.4-201ENST00000522985 181 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 AC018448.1-201ENST00000552843 316 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF543Q08ER8 AL121655.1-201ENST00000605811 308 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 AC022202.1-201ENST00000613515 211 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 U6.92-201ENST00000636464 89 ntBASIC2.51□□□□□ -2.01
ZNF543Q08ER8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF543Q08ER8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF543Q08ER8 RNU6-1264P-201ENST00000383891 107 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.389-201ENST00000383924 113 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 RNU6-926P-201ENST00000384075 107 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 RNU6-1310P-201ENST00000384153 107 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 RNU6-1235P-201ENST00000384559 107 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 SNORA48.3-201ENST00000391081 134 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 MRPL35P1-201ENST00000404272 572 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 TOMM22P2-201ENST00000430735 237 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 MTCO1P44-201ENST00000441935 243 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 RNU1-131P-201ENST00000458943 161 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 RNU6-625P-201ENST00000459412 107 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 RNU6-498P-201ENST00000459468 107 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 IGKV3-31-201ENST00000523109 329 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF543Q08ER8 MIR4659A-201ENST00000580269 81 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 AC124312.5-201ENST00000604451 268 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
ZNF543Q08ER8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF543Q08ER8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ZNF543Q08ER8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
ZNF543Q08ER8 LINC02555-201ENST00000563933 1951 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.326-201ENST00000365176 113 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 RNU6-418P-201ENST00000384035 107 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 RNU6-708P-201ENST00000384217 107 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 MIR548B-201ENST00000385247 97 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF543Q08ER8 AC139712.2-201ENST00000424302 339 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF543Q08ER8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF543Q08ER8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF543Q08ER8 AC006504.6-201ENST00000590142 199 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.772-201ENST00000606692 102 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF543Q08ER8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.49□□□□□ -2.01
ZNF543Q08ER8 AL357075.2-201ENST00000614906 189 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 AC240442.1-201ENST00000616055 283 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 AC010205.1-201ENST00000616668 449 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 snoZ196.1-201ENST00000625269 89 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 MTND4P1-201ENST00000457501 1466 ntBASIC2.49□□□□□ -2.01
ZNF543Q08ER8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
ZNF543Q08ER8 SNORD115-3-201ENST00000363100 82 ntBASIC2.48□□□□□ -2.01
ZNF543Q08ER8 RNA5SP475-201ENST00000410568 110 ntBASIC2.48□□□□□ -2.01
ZNF543Q08ER8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF543Q08ER8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF543Q08ER8 U8.20-201ENST00000459445 131 ntBASIC2.48□□□□□ -2.01
ZNF543Q08ER8 AC010531.2-201ENST00000465012 153 ntBASIC2.48□□□□□ -2.01
ZNF543Q08ER8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.48□□□□□ -2.01
ZNF543Q08ER8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.48□□□□□ -2.01
ZNF543Q08ER8 AC104695.3-201ENST00000604052 296 ntBASIC2.48□□□□□ -2.01
ZNF543Q08ER8 AC040896.1-201ENST00000613819 479 ntBASIC2.48□□□□□ -2.01
ZNF543Q08ER8 AC245884.12-201ENST00000615364 59 ntBASIC2.48□□□□□ -2.01
ZNF543Q08ER8 MIR219B-201ENST00000637023 88 ntBASIC2.48□□□□□ -2.01
ZNF543Q08ER8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
ZNF543Q08ER8 AC092881.1-201ENST00000638218 2733 ntBASIC2.48□□□□□ -2.01
ZNF543Q08ER8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.47□□□□□ -2.01
ZNF543Q08ER8 SNORA3A-201ENST00000364113 130 ntBASIC2.47□□□□□ -2.01
ZNF543Q08ER8 SNORA67.1-201ENST00000364749 141 ntBASIC2.47□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.380-201ENST00000365663 111 ntBASIC2.47□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.551-201ENST00000384661 102 ntBASIC2.47□□□□□ -2.01
ZNF543Q08ER8 Y_RNA.645-201ENST00000391229 102 ntBASIC2.47□□□□□ -2.01
ZNF543Q08ER8 ELOCP21-201ENST00000412558 336 ntBASIC2.47□□□□□ -2.01
ZNF543Q08ER8 AC008134.1-201ENST00000420943 193 ntBASIC2.47□□□□□ -2.01
ZNF543Q08ER8 snoU13.15-201ENST00000459407 104 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms