Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 RNA5SP385-201ENST00000515947 110 ntBASIC3.74□□□□□ -1.81
XPCQ01831 RN7SKP282-201ENST00000516824 299 ntBASIC3.74□□□□□ -1.81
XPCQ01831 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.74□□□□□ -1.81
XPCQ01831 AL109918.3-201ENST00000603072 338 ntBASIC3.74□□□□□ -1.81
XPCQ01831 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.74□□□□□ -1.81
XPCQ01831 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.74□□□□□ -1.81
XPCQ01831 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
XPCQ01831 AC092593.1-201ENST00000515413 1815 ntBASIC3.74□□□□□ -1.81
XPCQ01831 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
XPCQ01831 SNORA25.1-201ENST00000362326 128 ntBASIC3.73□□□□□ -1.81
XPCQ01831 RNU6-944P-201ENST00000364023 107 ntBASIC3.73□□□□□ -1.81
XPCQ01831 Y_RNA.418-201ENST00000384029 102 ntBASIC3.73□□□□□ -1.81
XPCQ01831 RNU6-1199P-201ENST00000411249 104 ntBASIC3.73□□□□□ -1.81
XPCQ01831 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.73□□□□□ -1.81
XPCQ01831 RPL32P35-201ENST00000415214 394 ntBASIC3.73□□□□□ -1.81
XPCQ01831 Z98742.3-201ENST00000418637 326 ntBASIC3.73□□□□□ -1.81
XPCQ01831 MIR449C-201ENST00000516047 92 ntBASIC3.73□□□□□ -1.81
XPCQ01831 RNU6-1098P-201ENST00000516772 96 ntBASIC3.73□□□□□ -1.81
XPCQ01831 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.73□□□□□ -1.81
XPCQ01831 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
XPCQ01831 AC009779.6-201ENST00000603972 165 ntBASIC3.73□□□□□ -1.81
XPCQ01831 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
XPCQ01831 Y_RNA.136-201ENST00000363444 102 ntBASIC3.72□□□□□ -1.81
XPCQ01831 Y_RNA.269-201ENST00000364685 89 ntBASIC3.72□□□□□ -1.81
XPCQ01831 MIR1294-201ENST00000408503 142 ntBASIC3.72□□□□□ -1.81
XPCQ01831 RNU2-54P-201ENST00000410299 190 ntBASIC3.72□□□□□ -1.81
XPCQ01831 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.72□□□□□ -1.81
XPCQ01831 AC096725.1-201ENST00000514266 313 ntBASIC3.72□□□□□ -1.81
XPCQ01831 RNU4-71P-201ENST00000516258 113 ntBASIC3.72□□□□□ -1.81
XPCQ01831 RNU6-155P-201ENST00000516347 100 ntBASIC3.72□□□□□ -1.81
XPCQ01831 RNU5F-4P-201ENST00000516581 114 ntBASIC3.72□□□□□ -1.81
XPCQ01831 RNU6-586P-201ENST00000517265 104 ntBASIC3.72□□□□□ -1.81
XPCQ01831 AC105245.1-201ENST00000581934 244 ntBASIC3.72□□□□□ -1.81
XPCQ01831 AC023043.3-201ENST00000593113 385 ntBASIC3.72□□□□□ -1.81
XPCQ01831 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.72□□□□□ -1.81
XPCQ01831 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
XPCQ01831 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
XPCQ01831 AC080128.1-201ENST00000474389 1917 ntBASIC3.72□□□□□ -1.81
XPCQ01831 FAM35CP-201ENST00000554755 2470 ntBASIC3.71□□□□□ -1.81
XPCQ01831 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
XPCQ01831 RNY1-201ENST00000364228 113 ntBASIC3.71□□□□□ -1.82
XPCQ01831 RNU6-200P-201ENST00000364743 107 ntBASIC3.71□□□□□ -1.82
XPCQ01831 RNU6-514P-201ENST00000384208 107 ntBASIC3.71□□□□□ -1.82
XPCQ01831 RN7SKP123-201ENST00000410732 291 ntBASIC3.71□□□□□ -1.82
XPCQ01831 MTCO1P5-201ENST00000433573 344 ntBASIC3.71□□□□□ -1.82
XPCQ01831 AC090515.1-201ENST00000465295 476 ntBASIC3.71□□□□□ -1.82
XPCQ01831 SRIP1-201ENST00000489235 288 ntBASIC3.71□□□□□ -1.82
XPCQ01831 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.71□□□□□ -1.82
XPCQ01831 MIR4506-201ENST00000584693 77 ntBASIC3.71□□□□□ -1.82
XPCQ01831 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.71□□□□□ -1.82
XPCQ01831 AC069294.1-201ENST00000608397 350 ntBASIC3.71□□□□□ -1.82
XPCQ01831 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
XPCQ01831 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.7□□□□□ -1.82
XPCQ01831 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
XPCQ01831 RNU6-454P-201ENST00000364292 107 ntBASIC3.7□□□□□ -1.82
XPCQ01831 MIR1289-2-201ENST00000408360 111 ntBASIC3.7□□□□□ -1.82
XPCQ01831 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.7□□□□□ -1.82
XPCQ01831 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.7□□□□□ -1.82
XPCQ01831 RNU6-138P-201ENST00000515952 107 ntBASIC3.7□□□□□ -1.82
XPCQ01831 AC008873.1-201ENST00000625051 138 ntBASIC3.7□□□□□ -1.82
XPCQ01831 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.7□□□□□ -1.82
XPCQ01831 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
XPCQ01831 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.69□□□□□ -1.82
XPCQ01831 SNORA46-201ENST00000384762 135 ntBASIC3.69□□□□□ -1.82
XPCQ01831 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.69□□□□□ -1.82
XPCQ01831 AC091959.1-201ENST00000495857 238 ntBASIC3.69□□□□□ -1.82
XPCQ01831 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.69□□□□□ -1.82
XPCQ01831 RNU2-12P-201ENST00000517216 168 ntBASIC3.69□□□□□ -1.82
XPCQ01831 RPL21P9-201ENST00000556149 474 ntBASIC3.69□□□□□ -1.82
XPCQ01831 AC130289.1-201ENST00000577321 73 ntBASIC3.69□□□□□ -1.82
XPCQ01831 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
XPCQ01831 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
XPCQ01831 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
XPCQ01831 U3.8-201ENST00000363675 217 ntBASIC3.68□□□□□ -1.82
XPCQ01831 RNU6-1305P-201ENST00000364353 104 ntBASIC3.68□□□□□ -1.82
XPCQ01831 RNU6-740P-201ENST00000364734 105 ntBASIC3.68□□□□□ -1.82
XPCQ01831 MIR548B-201ENST00000385247 97 ntBASIC3.68□□□□□ -1.82
XPCQ01831 UQCRHP3-201ENST00000451503 251 ntBASIC3.68□□□□□ -1.82
XPCQ01831 NDUFB4P10-201ENST00000452541 359 ntBASIC3.68□□□□□ -1.82
XPCQ01831 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.68□□□□□ -1.82
XPCQ01831 SNORA27.4-201ENST00000516650 95 ntBASIC3.68□□□□□ -1.82
XPCQ01831 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.68□□□□□ -1.82
XPCQ01831 ZNF861P-201ENST00000588126 639 ntBASIC3.68□□□□□ -1.82
XPCQ01831 AC006380.1-201ENST00000603598 186 ntBASIC3.68□□□□□ -1.82
XPCQ01831 Y_RNA.275-201ENST00000364726 110 ntBASIC3.67□□□□□ -1.82
XPCQ01831 MIR586-201ENST00000385035 97 ntBASIC3.67□□□□□ -1.82
XPCQ01831 RNU2-64P-201ENST00000411315 191 ntBASIC3.67□□□□□ -1.82
XPCQ01831 AC009310.1-201ENST00000414414 451 ntBASIC3.67□□□□□ -1.82
XPCQ01831 TOMM22P2-201ENST00000430735 237 ntBASIC3.67□□□□□ -1.82
XPCQ01831 RNU7-14P-201ENST00000459331 62 ntBASIC3.67□□□□□ -1.82
XPCQ01831 MIR3145-201ENST00000580727 82 ntBASIC3.67□□□□□ -1.82
XPCQ01831 AL162424.1-201ENST00000602325 221 ntBASIC3.67□□□□□ -1.82
XPCQ01831 AC025754.2-201ENST00000606491 432 ntBASIC3.67□□□□□ -1.82
XPCQ01831 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.67□□□□□ -1.82
XPCQ01831 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.67□□□□□ -1.82
XPCQ01831 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.67□□□□□ -1.82
XPCQ01831 MIR5739-201ENST00000619803 80 ntBASIC3.67□□□□□ -1.82
XPCQ01831 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
XPCQ01831 AC138915.1-201ENST00000565427 1685 ntBASIC3.67□□□□□ -1.82
XPCQ01831 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms