Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SNORD116-28-201ENST00000516123 91 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.11□□□□□ -2.23
CCNA1P78396 MIR3664-201ENST00000579074 99 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 AC004492.1-201ENST00000607036 742 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 Z99129.1-201ENST00000612510 255 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 AC126177.8-201ENST00000618339 1015 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 AL359880.1-201ENST00000621879 266 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 AL391516.1-201ENST00000554380 2449 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 BX322639.1-202ENST00000423987 2213 ntBASIC1.11□□□□□ -2.23
CCNA1P78396 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CCNA1P78396 Y_RNA.36-201ENST00000362602 112 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 SNORA33-201ENST00000363664 130 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 RNU6-522P-201ENST00000364497 107 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 RNU6-259P-201ENST00000383999 107 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 RNU6-214P-201ENST00000384130 107 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 SNORD116-1-201ENST00000384335 95 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 SNORA25-201ENST00000384384 134 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 RNU6-933P-201ENST00000384424 107 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CCNA1P78396 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CCNA1P78396 EIF4E2P1-201ENST00000393781 255 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 RNU6-1068P-201ENST00000410958 103 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 RPS26P42-201ENST00000413485 326 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 MTCO3P8-201ENST00000453691 755 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.1□□□□□ -2.23
CCNA1P78396 RNU7-34P-201ENST00000459394 64 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.1□□□□□ -2.23
CCNA1P78396 MTCO1P29-201ENST00000496868 288 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 RNU6-948P-201ENST00000516374 107 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 RNA5SP384-201ENST00000516615 116 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.1□□□□□ -2.23
CCNA1P78396 AC026470.2-201ENST00000561492 181 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 CYP3A137P-201ENST00000562436 69 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 AP000907.4-201ENST00000604143 237 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 AL022345.2-201ENST00000606307 135 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
CCNA1P78396 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.1□□□□□ -2.23
CCNA1P78396 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.1□□□□□ -2.23
CCNA1P78396 RNU6-534P-201ENST00000364877 106 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 RNA5SP259-201ENST00000365541 109 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 Y_RNA.481-201ENST00000384373 102 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.09□□□□□ -2.23
CCNA1P78396 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.09□□□□□ -2.23
CCNA1P78396 AC074290.1-201ENST00000448883 135 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 HSPE1P13-201ENST00000451143 297 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 AC091885.1-201ENST00000506658 268 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.09□□□□□ -2.23
CCNA1P78396 Y_RNA.693-201ENST00000516641 110 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.09□□□□□ -2.23
CCNA1P78396 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CCNA1P78396 AL512360.1-201ENST00000555346 234 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.09□□□□□ -2.23
CCNA1P78396 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.09□□□□□ -2.23
CCNA1P78396 AC136932.1-201ENST00000574771 208 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 TCL6_2.1-201ENST00000615162 119 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
CCNA1P78396 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.09□□□□□ -2.23
CCNA1P78396 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCNA1P78396 RNU6-1252P-201ENST00000363054 104 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 Y_RNA.372-201ENST00000365599 102 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 AC009237.7-201ENST00000447357 229 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 RNU7-187P-201ENST00000458985 68 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 Y_RNA.665-201ENST00000516177 98 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 Y_RNA.704-201ENST00000516851 102 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 CYCSP23-201ENST00000519781 313 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 MIR3973-201ENST00000579824 107 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 FGF7P1-201ENST00000582820 288 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 RNU6-89P-201ENST00000606519 100 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 MIR8076-201ENST00000611401 83 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 AC006001.4-201ENST00000622243 395 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 AC124864.2-201ENST00000624736 186 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 SCARNA4-201ENST00000629045 128 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 MIR338-201ENST00000636369 67 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 AC068137.3-201ENST00000639191 341 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 AC121333.1-201ENST00000567488 2709 ntBASIC1.08□□□□□ -2.24
CCNA1P78396 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CCNA1P78396 RNU6-1235P-201ENST00000384559 107 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 MTCO1P20-201ENST00000425366 358 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 ERLEC1P1-201ENST00000433806 578 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 SEPT14P3-201ENST00000439401 183 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.07□□□□□ -2.24
CCNA1P78396 AL732372.2-207ENST00000445840 183 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 NFU1P2-201ENST00000448700 469 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 SEPT14P2-201ENST00000453405 183 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 RNU6-498P-201ENST00000459468 107 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.07□□□□□ -2.24
CCNA1P78396 SEPT14P4-201ENST00000513445 186 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 RNU1-117P-201ENST00000517041 158 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.07□□□□□ -2.24
CCNA1P78396 MTND2P38-201ENST00000522536 667 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 AC024995.1-201ENST00000523014 93 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 FO082796.1-201ENST00000523795 183 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 MTND1P35-201ENST00000526739 508 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 CPDP1-201ENST00000579660 283 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 AC010525.2-201ENST00000590920 195 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 AC073534.2-201ENST00000620377 381 ntBASIC1.07□□□□□ -2.24
CCNA1P78396 ZNF204P-201ENST00000416749 2397 ntBASIC1.06□□□□□ -2.24
CCNA1P78396 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCNA1P78396 snoU2-30.2-201ENST00000362805 70 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms