Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SNORA25.14-201ENST00000516481 132 ntBASIC1.38□□□□□ -2.19
LIM2P55344 RNA5SP384-201ENST00000516615 116 ntBASIC1.38□□□□□ -2.19
LIM2P55344 CYCSP23-201ENST00000519781 313 ntBASIC1.38□□□□□ -2.19
LIM2P55344 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.38□□□□□ -2.19
LIM2P55344 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.38□□□□□ -2.19
LIM2P55344 AL121579.1-201ENST00000555129 305 ntBASIC1.38□□□□□ -2.19
LIM2P55344 HSBP1P1-201ENST00000555205 166 ntBASIC1.38□□□□□ -2.19
LIM2P55344 AC011712.1-201ENST00000588959 234 ntBASIC1.38□□□□□ -2.19
LIM2P55344 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.38□□□□□ -2.19
LIM2P55344 MIR6128-201ENST00000615528 109 ntBASIC1.38□□□□□ -2.19
LIM2P55344 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.38□□□□□ -2.19
LIM2P55344 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.38□□□□□ -2.19
LIM2P55344 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
LIM2P55344 RNU6-873P-201ENST00000363833 107 ntBASIC1.37□□□□□ -2.19
LIM2P55344 RNU6-793P-201ENST00000384233 104 ntBASIC1.37□□□□□ -2.19
LIM2P55344 Y_RNA.533-201ENST00000384596 114 ntBASIC1.37□□□□□ -2.19
LIM2P55344 MIR549A-201ENST00000385268 96 ntBASIC1.37□□□□□ -2.19
LIM2P55344 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
LIM2P55344 FGF7P8-201ENST00000402994 292 ntBASIC1.37□□□□□ -2.19
LIM2P55344 AC007098.1-201ENST00000420122 367 ntBASIC1.37□□□□□ -2.19
LIM2P55344 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.37□□□□□ -2.19
LIM2P55344 AC107399.1-201ENST00000451226 265 ntBASIC1.37□□□□□ -2.19
LIM2P55344 AC116353.2-201ENST00000505332 712 ntBASIC1.37□□□□□ -2.19
LIM2P55344 HMGN1P13-201ENST00000505795 138 ntBASIC1.37□□□□□ -2.19
LIM2P55344 AC026782.1-201ENST00000512952 449 ntBASIC1.37□□□□□ -2.19
LIM2P55344 RNU6-1114P-201ENST00000516022 107 ntBASIC1.37□□□□□ -2.19
LIM2P55344 RNU6-1041P-201ENST00000516254 102 ntBASIC1.37□□□□□ -2.19
LIM2P55344 Y_RNA.682-201ENST00000516457 100 ntBASIC1.37□□□□□ -2.19
LIM2P55344 Y_RNA.706-201ENST00000516933 99 ntBASIC1.37□□□□□ -2.19
LIM2P55344 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.37□□□□□ -2.19
LIM2P55344 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.37□□□□□ -2.19
LIM2P55344 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.37□□□□□ -2.19
LIM2P55344 MIR5701-3-201ENST00000578890 82 ntBASIC1.37□□□□□ -2.19
LIM2P55344 MIR5701-1-201ENST00000585138 82 ntBASIC1.37□□□□□ -2.19
LIM2P55344 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.37□□□□□ -2.19
LIM2P55344 MIR5701-2-201ENST00000615634 82 ntBASIC1.37□□□□□ -2.19
LIM2P55344 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.37□□□□□ -2.19
LIM2P55344 Y_RNA.339-201ENST00000365325 102 ntBASIC1.36□□□□□ -2.19
LIM2P55344 RNU6-842P-201ENST00000384269 107 ntBASIC1.36□□□□□ -2.19
LIM2P55344 Y_RNA.482-201ENST00000384377 111 ntBASIC1.36□□□□□ -2.19
LIM2P55344 MIR487A-201ENST00000385009 80 ntBASIC1.36□□□□□ -2.19
LIM2P55344 RPL30P16-201ENST00000419341 429 ntBASIC1.36□□□□□ -2.19
LIM2P55344 FO393415.2-201ENST00000480085 343 ntBASIC1.36□□□□□ -2.19
LIM2P55344 RPL36AP21-201ENST00000490372 323 ntBASIC1.36□□□□□ -2.19
LIM2P55344 AC018710.1-201ENST00000506509 158 ntBASIC1.36□□□□□ -2.19
LIM2P55344 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
LIM2P55344 MTND4LP26-201ENST00000518144 282 ntBASIC1.36□□□□□ -2.19
LIM2P55344 AC084364.2-201ENST00000546924 395 ntBASIC1.36□□□□□ -2.19
LIM2P55344 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.36□□□□□ -2.19
LIM2P55344 U8.1-201ENST00000362843 134 ntBASIC1.35□□□□□ -2.19
LIM2P55344 RNU6-414P-201ENST00000363705 104 ntBASIC1.35□□□□□ -2.19
LIM2P55344 RNU6-1240P-201ENST00000365155 104 ntBASIC1.35□□□□□ -2.19
LIM2P55344 Y_RNA.405-201ENST00000383979 100 ntBASIC1.35□□□□□ -2.19
LIM2P55344 RNU6-767P-201ENST00000384132 107 ntBASIC1.35□□□□□ -2.19
LIM2P55344 Y_RNA.451-201ENST00000384200 100 ntBASIC1.35□□□□□ -2.19
LIM2P55344 Y_RNA.524-201ENST00000384564 100 ntBASIC1.35□□□□□ -2.19
LIM2P55344 Y_RNA.561-201ENST00000384694 100 ntBASIC1.35□□□□□ -2.19
LIM2P55344 MIR10B-201ENST00000385011 110 ntBASIC1.35□□□□□ -2.19
LIM2P55344 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LIM2P55344 HMGN2P34-201ENST00000437647 269 ntBASIC1.35□□□□□ -2.19
LIM2P55344 JTBP1-201ENST00000441314 247 ntBASIC1.35□□□□□ -2.19
LIM2P55344 AC016717.1-201ENST00000448918 286 ntBASIC1.35□□□□□ -2.19
LIM2P55344 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.35□□□□□ -2.19
LIM2P55344 RPL26P26-201ENST00000480251 434 ntBASIC1.35□□□□□ -2.19
LIM2P55344 AC069439.1-201ENST00000494739 167 ntBASIC1.35□□□□□ -2.19
LIM2P55344 RNU6-307P-201ENST00000516743 106 ntBASIC1.35□□□□□ -2.19
LIM2P55344 Y_RNA.708-201ENST00000516950 96 ntBASIC1.35□□□□□ -2.19
LIM2P55344 AC025647.1-201ENST00000517879 253 ntBASIC1.35□□□□□ -2.19
LIM2P55344 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.35□□□□□ -2.19
LIM2P55344 MIR4285-201ENST00000581001 85 ntBASIC1.35□□□□□ -2.19
LIM2P55344 MIR4769-201ENST00000584126 77 ntBASIC1.35□□□□□ -2.19
LIM2P55344 AC005899.2-201ENST00000584353 90 ntBASIC1.35□□□□□ -2.19
LIM2P55344 AC126177.8-201ENST00000618339 1015 ntBASIC1.35□□□□□ -2.19
LIM2P55344 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LIM2P55344 MIR424-201ENST00000362227 98 ntBASIC1.34□□□□□ -2.19
LIM2P55344 Y_RNA.179-201ENST00000363844 90 ntBASIC1.34□□□□□ -2.19
LIM2P55344 Y_RNA.279-201ENST00000364763 95 ntBASIC1.34□□□□□ -2.19
LIM2P55344 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LIM2P55344 MIR1185-2-201ENST00000408687 86 ntBASIC1.34□□□□□ -2.19
LIM2P55344 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
LIM2P55344 Y_RNA.619-201ENST00000410951 90 ntBASIC1.34□□□□□ -2.19
LIM2P55344 RNU6-57P-201ENST00000411348 103 ntBASIC1.34□□□□□ -2.19
LIM2P55344 MTCYBP10-201ENST00000424905 650 ntBASIC1.34□□□□□ -2.19
LIM2P55344 AC108667.1-201ENST00000428618 249 ntBASIC1.34□□□□□ -2.19
LIM2P55344 SNRPGP13-201ENST00000442212 177 ntBASIC1.34□□□□□ -2.19
LIM2P55344 AC091179.3-201ENST00000474761 144 ntBASIC1.34□□□□□ -2.19
LIM2P55344 AC082651.2-201ENST00000496833 166 ntBASIC1.34□□□□□ -2.19
LIM2P55344 RNU1-117P-201ENST00000517041 158 ntBASIC1.34□□□□□ -2.19
LIM2P55344 AC105029.1-201ENST00000520250 669 ntBASIC1.34□□□□□ -2.19
LIM2P55344 AC090617.3-201ENST00000573670 475 ntBASIC1.34□□□□□ -2.19
LIM2P55344 MIR3684-201ENST00000579779 74 ntBASIC1.34□□□□□ -2.19
LIM2P55344 AC022432.1-201ENST00000595739 310 ntBASIC1.34□□□□□ -2.19
LIM2P55344 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.34□□□□□ -2.19
LIM2P55344 RNU6-1059P-201ENST00000363752 98 ntBASIC1.33□□□□□ -2.2
LIM2P55344 RNU6-338P-201ENST00000383888 105 ntBASIC1.33□□□□□ -2.2
LIM2P55344 RNU6-950P-201ENST00000384651 107 ntBASIC1.33□□□□□ -2.2
LIM2P55344 RNU6-700P-201ENST00000391043 107 ntBASIC1.33□□□□□ -2.2
LIM2P55344 MIR1253-201ENST00000408273 105 ntBASIC1.33□□□□□ -2.2
LIM2P55344 MIR548F5-201ENST00000408421 86 ntBASIC1.33□□□□□ -2.2
LIM2P55344 Y_RNA.594-201ENST00000410373 140 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms