Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL117342.1-201ENST00000404861 406 ntBASIC1.84□□□□□ -2.11
CDH13P55290 MIR1185-2-201ENST00000408687 86 ntBASIC1.84□□□□□ -2.11
CDH13P55290 RNA5SP100-201ENST00000410903 110 ntBASIC1.84□□□□□ -2.11
CDH13P55290 RNA5SP59-201ENST00000410922 110 ntBASIC1.84□□□□□ -2.11
CDH13P55290 RNU6-57P-201ENST00000411348 103 ntBASIC1.84□□□□□ -2.11
CDH13P55290 CST2P1-201ENST00000425770 87 ntBASIC1.84□□□□□ -2.11
CDH13P55290 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH13P55290 AC092423.1-201ENST00000430165 186 ntBASIC1.84□□□□□ -2.11
CDH13P55290 RNU6-470P-201ENST00000515954 104 ntBASIC1.84□□□□□ -2.11
CDH13P55290 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.84□□□□□ -2.11
CDH13P55290 AK6P2-201ENST00000549020 471 ntBASIC1.84□□□□□ -2.11
CDH13P55290 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH13P55290 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
CDH13P55290 AC125232.2-201ENST00000592457 143 ntBASIC1.84□□□□□ -2.11
CDH13P55290 AC008749.1-201ENST00000597650 306 ntBASIC1.84□□□□□ -2.11
CDH13P55290 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.84□□□□□ -2.11
CDH13P55290 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.84□□□□□ -2.11
CDH13P55290 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
CDH13P55290 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.83□□□□□ -2.12
CDH13P55290 Y_RNA.259-201ENST00000364619 101 ntBASIC1.83□□□□□ -2.12
CDH13P55290 SNORD87-201ENST00000364849 89 ntBASIC1.83□□□□□ -2.12
CDH13P55290 RNU6-1145P-201ENST00000384246 107 ntBASIC1.83□□□□□ -2.12
CDH13P55290 MIR625-201ENST00000385047 85 ntBASIC1.83□□□□□ -2.12
CDH13P55290 RNY4P36-201ENST00000391116 96 ntBASIC1.83□□□□□ -2.12
CDH13P55290 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.83□□□□□ -2.12
CDH13P55290 AC099677.2-201ENST00000436385 175 ntBASIC1.83□□□□□ -2.12
CDH13P55290 MTATP6P23-201ENST00000440153 476 ntBASIC1.83□□□□□ -2.12
CDH13P55290 AC010095.1-201ENST00000443543 144 ntBASIC1.83□□□□□ -2.12
CDH13P55290 MTCO3P10-201ENST00000455912 772 ntBASIC1.83□□□□□ -2.12
CDH13P55290 RPL30P15-201ENST00000457129 321 ntBASIC1.83□□□□□ -2.12
CDH13P55290 RNU7-87P-201ENST00000459343 62 ntBASIC1.83□□□□□ -2.12
CDH13P55290 AC022493.2-201ENST00000506122 481 ntBASIC1.83□□□□□ -2.12
CDH13P55290 RNU6-1041P-201ENST00000516254 102 ntBASIC1.83□□□□□ -2.12
CDH13P55290 Y_RNA.718-201ENST00000517110 102 ntBASIC1.83□□□□□ -2.12
CDH13P55290 AC025647.1-201ENST00000517879 253 ntBASIC1.83□□□□□ -2.12
CDH13P55290 AL355375.2-201ENST00000574825 175 ntBASIC1.83□□□□□ -2.12
CDH13P55290 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
CDH13P55290 AC069114.2-201ENST00000604699 304 ntBASIC1.83□□□□□ -2.12
CDH13P55290 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH13P55290 AC126177.8-201ENST00000618339 1015 ntBASIC1.83□□□□□ -2.12
CDH13P55290 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CDH13P55290 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CDH13P55290 RNU6-862P-201ENST00000362804 105 ntBASIC1.82□□□□□ -2.12
CDH13P55290 snoU2-30.2-201ENST00000362805 70 ntBASIC1.82□□□□□ -2.12
CDH13P55290 Y_RNA.358-201ENST00000365491 99 ntBASIC1.82□□□□□ -2.12
CDH13P55290 SNORD116-29-201ENST00000384516 83 ntBASIC1.82□□□□□ -2.12
CDH13P55290 MIR515-2-201ENST00000384883 83 ntBASIC1.82□□□□□ -2.12
CDH13P55290 MIR515-1-201ENST00000384884 83 ntBASIC1.82□□□□□ -2.12
CDH13P55290 RNU6-1156P-201ENST00000410365 100 ntBASIC1.82□□□□□ -2.12
CDH13P55290 Y_RNA.595-201ENST00000410403 105 ntBASIC1.82□□□□□ -2.12
CDH13P55290 RNU6-1001P-201ENST00000411265 100 ntBASIC1.82□□□□□ -2.12
CDH13P55290 MTCO2P27-201ENST00000420740 428 ntBASIC1.82□□□□□ -2.12
CDH13P55290 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH13P55290 HMGN2P19-201ENST00000425149 265 ntBASIC1.82□□□□□ -2.12
CDH13P55290 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDH13P55290 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH13P55290 MIR2053-201ENST00000459295 91 ntBASIC1.82□□□□□ -2.12
CDH13P55290 RNA5SP57-201ENST00000459463 123 ntBASIC1.82□□□□□ -2.12
CDH13P55290 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH13P55290 AC074133.1-201ENST00000515696 183 ntBASIC1.82□□□□□ -2.12
CDH13P55290 RNU6-507P-201ENST00000516045 100 ntBASIC1.82□□□□□ -2.12
CDH13P55290 RN7SKP49-201ENST00000516675 260 ntBASIC1.82□□□□□ -2.12
CDH13P55290 RNU7-4P-201ENST00000516961 62 ntBASIC1.82□□□□□ -2.12
CDH13P55290 AC091144.1-201ENST00000519573 138 ntBASIC1.82□□□□□ -2.12
CDH13P55290 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.82□□□□□ -2.12
CDH13P55290 MIR5094-201ENST00000578766 85 ntBASIC1.82□□□□□ -2.12
CDH13P55290 LARP7P1-201ENST00000605576 316 ntBASIC1.82□□□□□ -2.12
CDH13P55290 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.82□□□□□ -2.12
CDH13P55290 MIR338-201ENST00000636369 67 ntBASIC1.82□□□□□ -2.12
CDH13P55290 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.82□□□□□ -2.12
CDH13P55290 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CDH13P55290 RNU1-96P-201ENST00000364163 162 ntBASIC1.81□□□□□ -2.12
CDH13P55290 RNU6-1019P-201ENST00000364424 107 ntBASIC1.81□□□□□ -2.12
CDH13P55290 SNORA16.1-201ENST00000364597 132 ntBASIC1.81□□□□□ -2.12
CDH13P55290 RNU6-1240P-201ENST00000365155 104 ntBASIC1.81□□□□□ -2.12
CDH13P55290 Y_RNA.529-201ENST00000384586 119 ntBASIC1.81□□□□□ -2.12
CDH13P55290 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CDH13P55290 TOMM22P2-201ENST00000430735 237 ntBASIC1.81□□□□□ -2.12
CDH13P55290 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.81□□□□□ -2.12
CDH13P55290 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.81□□□□□ -2.12
CDH13P55290 RNU7-152P-201ENST00000458982 64 ntBASIC1.81□□□□□ -2.12
CDH13P55290 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.81□□□□□ -2.12
CDH13P55290 MIR4648-201ENST00000580107 72 ntBASIC1.81□□□□□ -2.12
CDH13P55290 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.81□□□□□ -2.12
CDH13P55290 AC116312.1-201ENST00000606841 314 ntBASIC1.81□□□□□ -2.12
CDH13P55290 MIR1244-1-201ENST00000612829 85 ntBASIC1.81□□□□□ -2.12
CDH13P55290 MIR1244-3-201ENST00000635744 85 ntBASIC1.81□□□□□ -2.12
CDH13P55290 MTND4LP32-201ENST00000636111 270 ntBASIC1.81□□□□□ -2.12
CDH13P55290 MIR1244-2-201ENST00000636449 85 ntBASIC1.81□□□□□ -2.12
CDH13P55290 MIR1244-4-202ENST00000636813 85 ntBASIC1.81□□□□□ -2.12
CDH13P55290 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
CDH13P55290 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.81□□□□□ -2.12
CDH13P55290 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDH13P55290 RNU6-490P-201ENST00000362985 107 ntBASIC1.8□□□□□ -2.12
CDH13P55290 RNU6-112P-201ENST00000363599 104 ntBASIC1.8□□□□□ -2.12
CDH13P55290 SNORA72.2-201ENST00000365028 127 ntBASIC1.8□□□□□ -2.12
CDH13P55290 MT-TD-201ENST00000387419 68 ntBASIC1.8□□□□□ -2.12
CDH13P55290 AC016909.1-201ENST00000415916 166 ntBASIC1.8□□□□□ -2.12
CDH13P55290 AC114482.1-201ENST00000418010 247 ntBASIC1.8□□□□□ -2.12
CDH13P55290 MTND4LP11-201ENST00000422184 280 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms