Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC025647.1-201ENST00000517879 253 ntBASIC0.99□□□□□ -2.25
CDH6P55285 MTND1P5-201ENST00000517906 940 ntBASIC0.99□□□□□ -2.25
CDH6P55285 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.99□□□□□ -2.25
CDH6P55285 TPRKBP2-201ENST00000565969 475 ntBASIC0.99□□□□□ -2.25
CDH6P55285 AL022345.2-201ENST00000606307 135 ntBASIC0.99□□□□□ -2.25
CDH6P55285 AL359075.3-201ENST00000613288 217 ntBASIC0.99□□□□□ -2.25
CDH6P55285 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.99□□□□□ -2.25
CDH6P55285 AC068647.2-201ENST00000637380 353 ntBASIC0.99□□□□□ -2.25
CDH6P55285 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CDH6P55285 AC121333.1-201ENST00000567488 2709 ntBASIC0.98□□□□□ -2.25
CDH6P55285 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
CDH6P55285 OR4G1P-203ENST00000641984 1631 ntBASIC0.98□□□□□ -2.25
CDH6P55285 RNU6-1240P-201ENST00000365155 104 ntBASIC0.98□□□□□ -2.25
CDH6P55285 RNU6-1042P-201ENST00000384204 107 ntBASIC0.98□□□□□ -2.25
CDH6P55285 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CDH6P55285 RNA5SP504-201ENST00000410676 117 ntBASIC0.98□□□□□ -2.25
CDH6P55285 MTCO1P20-201ENST00000425366 358 ntBASIC0.98□□□□□ -2.25
CDH6P55285 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.98□□□□□ -2.25
CDH6P55285 AL445305.1-201ENST00000432577 575 ntBASIC0.98□□□□□ -2.25
CDH6P55285 AC005002.2-201ENST00000438228 269 ntBASIC0.98□□□□□ -2.25
CDH6P55285 RNU6-221P-201ENST00000459541 99 ntBASIC0.98□□□□□ -2.25
CDH6P55285 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.98□□□□□ -2.25
CDH6P55285 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.98□□□□□ -2.25
CDH6P55285 CYCSP23-201ENST00000519781 313 ntBASIC0.98□□□□□ -2.25
CDH6P55285 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.98□□□□□ -2.25
CDH6P55285 AL158211.1-201ENST00000566763 763 ntBASIC0.98□□□□□ -2.25
CDH6P55285 AC136932.1-201ENST00000574771 208 ntBASIC0.98□□□□□ -2.25
CDH6P55285 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.98□□□□□ -2.25
CDH6P55285 RNU6-89P-201ENST00000606519 100 ntBASIC0.98□□□□□ -2.25
CDH6P55285 SNORD11B-201ENST00000607707 90 ntBASIC0.98□□□□□ -2.25
CDH6P55285 AP000568.1-201ENST00000282964 442 ntBASIC0.97□□□□□ -2.25
CDH6P55285 MIR337-201ENST00000362281 93 ntBASIC0.97□□□□□ -2.25
CDH6P55285 SNORD50.1-201ENST00000362987 71 ntBASIC0.97□□□□□ -2.25
CDH6P55285 RNU6-1252P-201ENST00000363054 104 ntBASIC0.97□□□□□ -2.25
CDH6P55285 Y_RNA.151-201ENST00000363566 112 ntBASIC0.97□□□□□ -2.25
CDH6P55285 SNORD87-201ENST00000364849 89 ntBASIC0.97□□□□□ -2.25
CDH6P55285 Y_RNA.372-201ENST00000365599 102 ntBASIC0.97□□□□□ -2.25
CDH6P55285 RNU6-1080P-201ENST00000383982 107 ntBASIC0.97□□□□□ -2.25
CDH6P55285 MIR32-201ENST00000384965 70 ntBASIC0.97□□□□□ -2.25
CDH6P55285 MTCO3P40-201ENST00000392516 676 ntBASIC0.97□□□□□ -2.25
CDH6P55285 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.97□□□□□ -2.25
CDH6P55285 MTATP6P17-201ENST00000431030 672 ntBASIC0.97□□□□□ -2.25
CDH6P55285 Z82188.1-201ENST00000436709 154 ntBASIC0.97□□□□□ -2.25
CDH6P55285 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.97□□□□□ -2.25
CDH6P55285 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.97□□□□□ -2.25
CDH6P55285 AC012676.2-201ENST00000619258 186 ntBASIC0.97□□□□□ -2.25
CDH6P55285 U6.108-201ENST00000637764 58 ntBASIC0.97□□□□□ -2.25
CDH6P55285 AL391516.1-201ENST00000554380 2449 ntBASIC0.96□□□□□ -2.26
CDH6P55285 CALM2P3-201ENST00000400429 449 ntBASIC0.96□□□□□ -2.26
CDH6P55285 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.96□□□□□ -2.26
CDH6P55285 ERLEC1P1-201ENST00000433806 578 ntBASIC0.96□□□□□ -2.26
CDH6P55285 AL353572.1-201ENST00000442490 417 ntBASIC0.96□□□□□ -2.26
CDH6P55285 AC079354.2-201ENST00000453523 154 ntBASIC0.96□□□□□ -2.26
CDH6P55285 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
CDH6P55285 SNORA31.10-201ENST00000516482 106 ntBASIC0.96□□□□□ -2.26
CDH6P55285 RNU6-405P-201ENST00000516637 110 ntBASIC0.96□□□□□ -2.26
CDH6P55285 RNA5SP54-201ENST00000516951 92 ntBASIC0.96□□□□□ -2.26
CDH6P55285 RNU6-165P-201ENST00000517170 99 ntBASIC0.96□□□□□ -2.26
CDH6P55285 AC026407.1-201ENST00000518369 204 ntBASIC0.96□□□□□ -2.26
CDH6P55285 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.96□□□□□ -2.26
CDH6P55285 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.96□□□□□ -2.26
CDH6P55285 AC022217.4-201ENST00000604389 163 ntBASIC0.96□□□□□ -2.26
CDH6P55285 AL359880.1-201ENST00000621879 266 ntBASIC0.96□□□□□ -2.26
CDH6P55285 AL133216.2-202ENST00000634512 349 ntBASIC0.96□□□□□ -2.26
CDH6P55285 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
CDH6P55285 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CDH6P55285 RNU6-254P-201ENST00000363377 107 ntBASIC0.95□□□□□ -2.26
CDH6P55285 RNU6-727P-201ENST00000363592 107 ntBASIC0.95□□□□□ -2.26
CDH6P55285 RNU6-259P-201ENST00000383999 107 ntBASIC0.95□□□□□ -2.26
CDH6P55285 RNU6-245P-201ENST00000384020 107 ntBASIC0.95□□□□□ -2.26
CDH6P55285 MIR222-201ENST00000384992 110 ntBASIC0.95□□□□□ -2.26
CDH6P55285 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
CDH6P55285 RNU6-780P-201ENST00000391030 104 ntBASIC0.95□□□□□ -2.26
CDH6P55285 RNU6-1186P-201ENST00000410429 97 ntBASIC0.95□□□□□ -2.26
CDH6P55285 RNU2-66P-201ENST00000410650 161 ntBASIC0.95□□□□□ -2.26
CDH6P55285 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.95□□□□□ -2.26
CDH6P55285 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.95□□□□□ -2.26
CDH6P55285 SNORA25.14-201ENST00000516481 132 ntBASIC0.95□□□□□ -2.26
CDH6P55285 Y_RNA.693-201ENST00000516641 110 ntBASIC0.95□□□□□ -2.26
CDH6P55285 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.95□□□□□ -2.26
CDH6P55285 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.95□□□□□ -2.26
CDH6P55285 AL512360.1-201ENST00000555346 234 ntBASIC0.95□□□□□ -2.26
CDH6P55285 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.95□□□□□ -2.26
CDH6P55285 AC010525.2-201ENST00000590920 195 ntBASIC0.95□□□□□ -2.26
CDH6P55285 AL390123.1-201ENST00000603216 237 ntBASIC0.95□□□□□ -2.26
CDH6P55285 MIR8054-201ENST00000620877 86 ntBASIC0.95□□□□□ -2.26
CDH6P55285 AC006504.8-201ENST00000621046 635 ntBASIC0.95□□□□□ -2.26
CDH6P55285 AC068137.3-201ENST00000639191 341 ntBASIC0.95□□□□□ -2.26
CDH6P55285 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
CDH6P55285 RNU6-873P-201ENST00000363833 107 ntBASIC0.94□□□□□ -2.26
CDH6P55285 Y_RNA.319-201ENST00000365138 92 ntBASIC0.94□□□□□ -2.26
CDH6P55285 Y_RNA.373-201ENST00000365600 103 ntBASIC0.94□□□□□ -2.26
CDH6P55285 RNU6-128P-201ENST00000383976 107 ntBASIC0.94□□□□□ -2.26
CDH6P55285 AL590632.1-201ENST00000424289 371 ntBASIC0.94□□□□□ -2.26
CDH6P55285 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.94□□□□□ -2.26
CDH6P55285 AC245047.3-201ENST00000429428 127 ntBASIC0.94□□□□□ -2.26
CDH6P55285 SEPT14P3-201ENST00000439401 183 ntBASIC0.94□□□□□ -2.26
CDH6P55285 AL732372.2-207ENST00000445840 183 ntBASIC0.94□□□□□ -2.26
CDH6P55285 SEPT14P2-201ENST00000453405 183 ntBASIC0.94□□□□□ -2.26
CDH6P55285 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms