Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.87□□□□□ -2.11
LIMK1P53667 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
LIMK1P53667 AC100812.1-201ENST00000607622 580 ntBASIC1.87□□□□□ -2.11
LIMK1P53667 MIR6504-201ENST00000613520 61 ntBASIC1.87□□□□□ -2.11
LIMK1P53667 AC084768.2-201ENST00000622736 221 ntBASIC1.87□□□□□ -2.11
LIMK1P53667 TPTEP1-208ENST00000636884 213 ntBASIC1.87□□□□□ -2.11
LIMK1P53667 MIR340-201ENST00000362125 95 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 RNU6-137P-201ENST00000363680 108 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 RNU6-873P-201ENST00000363833 107 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 SNORD81.2-201ENST00000365153 76 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 RNU6-331P-201ENST00000384724 107 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 AC004866.1-201ENST00000411748 78 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 AC138393.2-201ENST00000414742 246 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 NCOR1P3-201ENST00000420479 303 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 AL357134.1-201ENST00000445848 426 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 ATP5J2P3-201ENST00000451550 258 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.86□□□□□ -2.11
LIMK1P53667 RNU7-57P-201ENST00000459540 60 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.86□□□□□ -2.11
LIMK1P53667 RNU6-1041P-201ENST00000516254 102 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 RNVU1-2-201ENST00000516326 135 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 RNU6-307P-201ENST00000516743 106 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.86□□□□□ -2.11
LIMK1P53667 AC027288.2-201ENST00000553028 243 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 UBL5P4-201ENST00000562584 236 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 AC104581.2-201ENST00000572227 430 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 MIR5094-201ENST00000578766 85 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 AC005899.2-201ENST00000584353 90 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.86□□□□□ -2.11
LIMK1P53667 BX248123.2-201ENST00000606318 124 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 AL355802.3-201ENST00000607571 545 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 SNORD11B-201ENST00000607707 90 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.86□□□□□ -2.11
LIMK1P53667 AC022306.2-201ENST00000617563 647 ntBASIC1.86□□□□□ -2.11
LIMK1P53667 RNU6-727P-201ENST00000363592 107 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 Y_RNA.166-201ENST00000363730 102 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 SNORD115-8-201ENST00000363856 82 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 RNU6-392P-201ENST00000364926 101 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 SNORD115-38-201ENST00000365037 82 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 SNORA48.1-201ENST00000390879 135 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 RNU6-159P-201ENST00000391080 106 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 SNORA75.4-201ENST00000391278 119 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 AL353997.1-201ENST00000432936 108 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.85□□□□□ -2.11
LIMK1P53667 Y_RNA.635-201ENST00000459041 101 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 AP000870.1-201ENST00000472927 406 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 AC067942.3-201ENST00000512025 362 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 RNU6-344P-201ENST00000516635 111 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.85□□□□□ -2.11
LIMK1P53667 MIR5695-201ENST00000579717 85 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 MIR4285-201ENST00000581001 85 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 RBM11P1-201ENST00000604951 799 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.85□□□□□ -2.11
LIMK1P53667 AL512598.1-201ENST00000610158 273 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.85□□□□□ -2.11
LIMK1P53667 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LIMK1P53667 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMK1P53667 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
LIMK1P53667 RNY1P16-201ENST00000363063 111 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 Y_RNA.179-201ENST00000363844 90 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 RNU4-42P-201ENST00000364738 142 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 RNU6-975P-201ENST00000384296 105 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 MIR586-201ENST00000385035 97 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 MIR30A-201ENST00000385092 71 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 MIR1253-201ENST00000408273 105 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 PDCL2P1-201ENST00000419302 352 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 USP9YP16-201ENST00000430287 407 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 RBMX2P4-201ENST00000441256 376 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 USP9YP23-201ENST00000455085 407 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.84□□□□□ -2.11
LIMK1P53667 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.84□□□□□ -2.11
LIMK1P53667 MTND4P17-201ENST00000470444 350 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 AC116353.2-201ENST00000505332 712 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.84□□□□□ -2.11
LIMK1P53667 AC093303.1-201ENST00000514549 295 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 RNU2-34P-201ENST00000516534 121 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 AC005730.3-201ENST00000583067 366 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.84□□□□□ -2.11
LIMK1P53667 MTND4P12-201ENST00000498999 1377 ntBASIC1.84□□□□□ -2.12
LIMK1P53667 RNU1-62P-201ENST00000362599 164 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 Y_RNA.106-201ENST00000363189 100 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 RNY1P14-201ENST00000384426 108 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 RNU6-57P-201ENST00000411348 103 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.83□□□□□ -2.12
LIMK1P53667 HMGN2P9-201ENST00000476875 229 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 HMGN1P12-201ENST00000499125 195 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.83□□□□□ -2.12
LIMK1P53667 SNORA20.3-201ENST00000516880 132 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.83□□□□□ -2.12
LIMK1P53667 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.83□□□□□ -2.12
LIMK1P53667 AL121579.1-201ENST00000555129 305 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 MIR4303-201ENST00000581299 66 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 MIR5690-201ENST00000583739 73 ntBASIC1.83□□□□□ -2.12
LIMK1P53667 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.83□□□□□ -2.12
LIMK1P53667 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.83□□□□□ -2.12
LIMK1P53667 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms