Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC140059.1-201ENST00000489238 361 ntBASIC2.58□□□□□ -2
COPB1P53618 RPS23P5-201ENST00000495419 428 ntBASIC2.58□□□□□ -2
COPB1P53618 AC008413.1-201ENST00000511864 177 ntBASIC2.58□□□□□ -2
COPB1P53618 RNU6-344P-201ENST00000516635 111 ntBASIC2.58□□□□□ -2
COPB1P53618 SCARNA3-201ENST00000517097 143 ntBASIC2.58□□□□□ -2
COPB1P53618 RN7SKP40-201ENST00000517211 242 ntBASIC2.58□□□□□ -2
COPB1P53618 AC018448.1-201ENST00000552843 316 ntBASIC2.58□□□□□ -2
COPB1P53618 AC055872.1-201ENST00000570978 278 ntBASIC2.58□□□□□ -2
COPB1P53618 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.58□□□□□ -2
COPB1P53618 MIR7157-201ENST00000635801 60 ntBASIC2.58□□□□□ -2
COPB1P53618 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
COPB1P53618 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.58□□□□□ -2
COPB1P53618 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
COPB1P53618 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COPB1P53618 AC135776.4-201ENST00000624300 1904 ntBASIC2.58□□□□□ -2
COPB1P53618 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.57□□□□□ -2
COPB1P53618 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.57□□□□□ -2
COPB1P53618 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COPB1P53618 MIR335-201ENST00000362173 94 ntBASIC2.57□□□□□ -2
COPB1P53618 Y_RNA.230-201ENST00000364348 109 ntBASIC2.57□□□□□ -2
COPB1P53618 SNORD114-30-201ENST00000364448 72 ntBASIC2.57□□□□□ -2
COPB1P53618 Y_RNA.350-201ENST00000365409 98 ntBASIC2.57□□□□□ -2
COPB1P53618 SNORA67.2-201ENST00000384300 149 ntBASIC2.57□□□□□ -2
COPB1P53618 Y_RNA.476-201ENST00000384347 108 ntBASIC2.57□□□□□ -2
COPB1P53618 RNU6-1274P-201ENST00000384557 107 ntBASIC2.57□□□□□ -2
COPB1P53618 MIR627-201ENST00000384979 97 ntBASIC2.57□□□□□ -2
COPB1P53618 RNU5A-5P-201ENST00000411054 116 ntBASIC2.57□□□□□ -2
COPB1P53618 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.57□□□□□ -2
COPB1P53618 AC108059.2-201ENST00000434626 151 ntBASIC2.57□□□□□ -2
COPB1P53618 AC009237.7-201ENST00000447357 229 ntBASIC2.57□□□□□ -2
COPB1P53618 HSPE1P25-201ENST00000455484 251 ntBASIC2.57□□□□□ -2
COPB1P53618 YWHAEP4-201ENST00000505390 198 ntBASIC2.57□□□□□ -2
COPB1P53618 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.57□□□□□ -2
COPB1P53618 RNU2-44P-201ENST00000516795 194 ntBASIC2.57□□□□□ -2
COPB1P53618 HSPE1P18-201ENST00000517602 280 ntBASIC2.57□□□□□ -2
COPB1P53618 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.57□□□□□ -2
COPB1P53618 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.57□□□□□ -2
COPB1P53618 AC012433.1-201ENST00000588916 398 ntBASIC2.57□□□□□ -2
COPB1P53618 MIR6817-201ENST00000615588 66 ntBASIC2.57□□□□□ -2
COPB1P53618 AL590808.1-201ENST00000618696 141 ntBASIC2.57□□□□□ -2
COPB1P53618 AC080128.1-201ENST00000474389 1917 ntBASIC2.57□□□□□ -2
COPB1P53618 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.57□□□□□ -2
COPB1P53618 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.56□□□□□ -2
COPB1P53618 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
COPB1P53618 Y_RNA.16-201ENST00000362421 102 ntBASIC2.56□□□□□ -2
COPB1P53618 RNU6-727P-201ENST00000363592 107 ntBASIC2.56□□□□□ -2
COPB1P53618 Y_RNA.237-201ENST00000364439 102 ntBASIC2.56□□□□□ -2
COPB1P53618 Y_RNA.286-201ENST00000364813 102 ntBASIC2.56□□□□□ -2
COPB1P53618 MIR218-1-201ENST00000384999 110 ntBASIC2.56□□□□□ -2
COPB1P53618 Y_RNA.597-201ENST00000410463 100 ntBASIC2.56□□□□□ -2
COPB1P53618 Y_RNA.602-201ENST00000410535 92 ntBASIC2.56□□□□□ -2
COPB1P53618 AL121890.1-201ENST00000435457 205 ntBASIC2.56□□□□□ -2
COPB1P53618 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.56□□□□□ -2
COPB1P53618 UQCRBP2-201ENST00000447827 297 ntBASIC2.56□□□□□ -2
COPB1P53618 UBL5P3-201ENST00000475112 231 ntBASIC2.56□□□□□ -2
COPB1P53618 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.56□□□□□ -2
COPB1P53618 SNORA31.11-201ENST00000516528 139 ntBASIC2.56□□□□□ -2
COPB1P53618 RNU6-794P-201ENST00000517261 64 ntBASIC2.56□□□□□ -2
COPB1P53618 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.56□□□□□ -2
COPB1P53618 AP002001.1-203ENST00000534002 267 ntBASIC2.56□□□□□ -2
COPB1P53618 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.56□□□□□ -2
COPB1P53618 RPL17P51-201ENST00000605218 238 ntBASIC2.56□□□□□ -2
COPB1P53618 AC103810.6-201ENST00000606708 136 ntBASIC2.56□□□□□ -2
COPB1P53618 SDR42E1P4-201ENST00000620894 481 ntBASIC2.56□□□□□ -2
COPB1P53618 AC127459.3-201ENST00000624328 466 ntBASIC2.56□□□□□ -2
COPB1P53618 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.56□□□□□ -2
COPB1P53618 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
COPB1P53618 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COPB1P53618 MTND5P6-201ENST00000422338 1798 ntBASIC2.56□□□□□ -2
COPB1P53618 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
COPB1P53618 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
COPB1P53618 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
COPB1P53618 MIR410-201ENST00000362222 80 ntBASIC2.55□□□□□ -2
COPB1P53618 RNA5SP68-201ENST00000363885 119 ntBASIC2.55□□□□□ -2
COPB1P53618 RNU6-944P-201ENST00000364023 107 ntBASIC2.55□□□□□ -2
COPB1P53618 Y_RNA.415-201ENST00000384012 112 ntBASIC2.55□□□□□ -2
COPB1P53618 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
COPB1P53618 RNU6-625P-201ENST00000459412 107 ntBASIC2.55□□□□□ -2
COPB1P53618 AC080013.2-201ENST00000460866 323 ntBASIC2.55□□□□□ -2
COPB1P53618 AC090515.1-201ENST00000465295 476 ntBASIC2.55□□□□□ -2
COPB1P53618 RNU6-1338P-201ENST00000516328 91 ntBASIC2.55□□□□□ -2
COPB1P53618 RNA5SP148-201ENST00000516527 94 ntBASIC2.55□□□□□ -2
COPB1P53618 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.55□□□□□ -2
COPB1P53618 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.55□□□□□ -2
COPB1P53618 AC105245.1-201ENST00000581934 244 ntBASIC2.55□□□□□ -2
COPB1P53618 MIR3128-201ENST00000581957 66 ntBASIC2.55□□□□□ -2
COPB1P53618 MIR3199-1-201ENST00000582434 88 ntBASIC2.55□□□□□ -2
COPB1P53618 MIR5006-201ENST00000583027 110 ntBASIC2.55□□□□□ -2
COPB1P53618 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.55□□□□□ -2
COPB1P53618 AL670379.2-201ENST00000604983 252 ntBASIC2.55□□□□□ -2
COPB1P53618 SNORD113-5-201ENST00000607261 78 ntBASIC2.55□□□□□ -2
COPB1P53618 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.55□□□□□ -2
COPB1P53618 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
COPB1P53618 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.55□□□□□ -2
COPB1P53618 AC005336.3-201ENST00000623833 2679 ntBASIC2.55□□□□□ -2
COPB1P53618 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.54□□□□□ -2
COPB1P53618 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
COPB1P53618 ZNF720P1-201ENST00000562403 1939 ntBASIC2.54□□□□□ -2
COPB1P53618 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COPB1P53618 RNU6-1318P-201ENST00000365389 103 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms