Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-717P-201ENST00000459076 104 ntBASIC1.93□□□□□ -2.1
PDX1P52945 AK6P2-201ENST00000549020 471 ntBASIC1.93□□□□□ -2.1
PDX1P52945 SNORD11B-201ENST00000607707 90 ntBASIC1.93□□□□□ -2.1
PDX1P52945 AC005296.1-201ENST00000616145 209 ntBASIC1.93□□□□□ -2.1
PDX1P52945 MTND4P29-201ENST00000503122 1372 ntBASIC1.93□□□□□ -2.1
PDX1P52945 LINC02555-201ENST00000563933 1951 ntBASIC1.92□□□□□ -2.1
PDX1P52945 MIR369-201ENST00000362155 70 ntBASIC1.92□□□□□ -2.1
PDX1P52945 Y_RNA.5-201ENST00000362334 102 ntBASIC1.92□□□□□ -2.1
PDX1P52945 Y_RNA.140-201ENST00000363474 103 ntBASIC1.92□□□□□ -2.1
PDX1P52945 RNU6-280P-201ENST00000364145 104 ntBASIC1.92□□□□□ -2.1
PDX1P52945 RNU4-42P-201ENST00000364738 142 ntBASIC1.92□□□□□ -2.1
PDX1P52945 Y_RNA.314-201ENST00000365114 102 ntBASIC1.92□□□□□ -2.1
PDX1P52945 RNU6-418P-201ENST00000384035 107 ntBASIC1.92□□□□□ -2.1
PDX1P52945 RNU6-793P-201ENST00000384233 104 ntBASIC1.92□□□□□ -2.1
PDX1P52945 RNU6-318P-201ENST00000384283 103 ntBASIC1.92□□□□□ -2.1
PDX1P52945 MIR625-201ENST00000385047 85 ntBASIC1.92□□□□□ -2.1
PDX1P52945 AL033519.2-201ENST00000403958 392 ntBASIC1.92□□□□□ -2.1
PDX1P52945 Y_RNA.592-201ENST00000410274 109 ntBASIC1.92□□□□□ -2.1
PDX1P52945 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
PDX1P52945 AC096644.2-201ENST00000429278 159 ntBASIC1.92□□□□□ -2.1
PDX1P52945 MTCO1P44-201ENST00000441935 243 ntBASIC1.92□□□□□ -2.1
PDX1P52945 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.92□□□□□ -2.1
PDX1P52945 AC016717.1-201ENST00000448918 286 ntBASIC1.92□□□□□ -2.1
PDX1P52945 RNU7-169P-201ENST00000459456 61 ntBASIC1.92□□□□□ -2.1
PDX1P52945 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
PDX1P52945 AC022868.1-201ENST00000517767 391 ntBASIC1.92□□□□□ -2.1
PDX1P52945 MIR4448-201ENST00000584360 86 ntBASIC1.92□□□□□ -2.1
PDX1P52945 AL357075.2-201ENST00000614906 189 ntBASIC1.92□□□□□ -2.1
PDX1P52945 AL160413.1-201ENST00000622780 310 ntBASIC1.92□□□□□ -2.1
PDX1P52945 AC138305.3-201ENST00000624988 240 ntBASIC1.92□□□□□ -2.1
PDX1P52945 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PDX1P52945 RNU1-62P-201ENST00000362599 164 ntBASIC1.91□□□□□ -2.1
PDX1P52945 RNU6-1305P-201ENST00000364353 104 ntBASIC1.91□□□□□ -2.1
PDX1P52945 RNA5SP37-201ENST00000365420 130 ntBASIC1.91□□□□□ -2.1
PDX1P52945 SNORD42.2-201ENST00000365570 69 ntBASIC1.91□□□□□ -2.1
PDX1P52945 MIR329-1-201ENST00000385028 80 ntBASIC1.91□□□□□ -2.1
PDX1P52945 MIR586-201ENST00000385035 97 ntBASIC1.91□□□□□ -2.1
PDX1P52945 SNORA17.3-201ENST00000391159 129 ntBASIC1.91□□□□□ -2.1
PDX1P52945 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PDX1P52945 RNA5SP450-201ENST00000411206 102 ntBASIC1.91□□□□□ -2.1
PDX1P52945 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PDX1P52945 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.91□□□□□ -2.1
PDX1P52945 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.91□□□□□ -2.1
PDX1P52945 AC055731.1-201ENST00000474387 401 ntBASIC1.91□□□□□ -2.1
PDX1P52945 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.91□□□□□ -2.1
PDX1P52945 AC087441.2-201ENST00000529141 262 ntBASIC1.91□□□□□ -2.1
PDX1P52945 MIR3169-201ENST00000578032 83 ntBASIC1.91□□□□□ -2.1
PDX1P52945 AL080274.1-201ENST00000605565 220 ntBASIC1.91□□□□□ -2.1
PDX1P52945 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.91□□□□□ -2.1
PDX1P52945 AC010999.1-201ENST00000611856 324 ntBASIC1.91□□□□□ -2.1
PDX1P52945 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.91□□□□□ -2.1
PDX1P52945 AC091925.1-201ENST00000623204 462 ntBASIC1.91□□□□□ -2.1
PDX1P52945 AC022513.1-201ENST00000624512 117 ntBASIC1.91□□□□□ -2.1
PDX1P52945 Y_RNA.179-201ENST00000363844 90 ntBASIC1.9□□□□□ -2.11
PDX1P52945 RNU6-879P-201ENST00000364328 108 ntBASIC1.9□□□□□ -2.11
PDX1P52945 SNORA6-201ENST00000384033 151 ntBASIC1.9□□□□□ -2.11
PDX1P52945 RNU6-160P-201ENST00000384591 107 ntBASIC1.9□□□□□ -2.11
PDX1P52945 MIR29C-201ENST00000385231 88 ntBASIC1.9□□□□□ -2.11
PDX1P52945 SNORA69.1-201ENST00000390904 137 ntBASIC1.9□□□□□ -2.11
PDX1P52945 MIR300-201ENST00000401138 83 ntBASIC1.9□□□□□ -2.11
PDX1P52945 Y_RNA.661-201ENST00000516003 99 ntBASIC1.9□□□□□ -2.11
PDX1P52945 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
PDX1P52945 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
PDX1P52945 RNU2-19P-201ENST00000517288 84 ntBASIC1.9□□□□□ -2.11
PDX1P52945 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
PDX1P52945 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.9□□□□□ -2.11
PDX1P52945 MIR4753-201ENST00000585119 83 ntBASIC1.9□□□□□ -2.11
PDX1P52945 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
PDX1P52945 AL078596.1-201ENST00000624856 447 ntBASIC1.9□□□□□ -2.11
PDX1P52945 AC068205.3-201ENST00000636385 468 ntBASIC1.9□□□□□ -2.11
PDX1P52945 MTND5P35-201ENST00000557537 1720 ntBASIC1.89□□□□□ -2.11
PDX1P52945 RNU1-58P-201ENST00000362413 163 ntBASIC1.89□□□□□ -2.11
PDX1P52945 RNU6-1301P-201ENST00000362724 104 ntBASIC1.89□□□□□ -2.11
PDX1P52945 RNU6-23P-201ENST00000363283 107 ntBASIC1.89□□□□□ -2.11
PDX1P52945 Y_RNA.197-201ENST00000364004 102 ntBASIC1.89□□□□□ -2.11
PDX1P52945 RNA5SP493-201ENST00000364115 91 ntBASIC1.89□□□□□ -2.11
PDX1P52945 Y_RNA.813-201ENST00000364639 102 ntBASIC1.89□□□□□ -2.11
PDX1P52945 RNU6-308P-201ENST00000390957 107 ntBASIC1.89□□□□□ -2.11
PDX1P52945 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
PDX1P52945 AC099799.1-201ENST00000439809 192 ntBASIC1.89□□□□□ -2.11
PDX1P52945 AC003989.2-201ENST00000440224 169 ntBASIC1.89□□□□□ -2.11
PDX1P52945 AC245102.2-201ENST00000448956 180 ntBASIC1.89□□□□□ -2.11
PDX1P52945 AC007395.1-201ENST00000451333 677 ntBASIC1.89□□□□□ -2.11
PDX1P52945 Y_RNA.639-201ENST00000458981 102 ntBASIC1.89□□□□□ -2.11
PDX1P52945 HMGN1P13-201ENST00000505795 138 ntBASIC1.89□□□□□ -2.11
PDX1P52945 RNA5SP182-201ENST00000516064 82 ntBASIC1.89□□□□□ -2.11
PDX1P52945 Y_RNA.683-201ENST00000516508 93 ntBASIC1.89□□□□□ -2.11
PDX1P52945 RNU7-4P-201ENST00000516961 62 ntBASIC1.89□□□□□ -2.11
PDX1P52945 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.89□□□□□ -2.11
PDX1P52945 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.89□□□□□ -2.11
PDX1P52945 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.89□□□□□ -2.11
PDX1P52945 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
PDX1P52945 uc_338.22-201ENST00000622722 187 ntBASIC1.89□□□□□ -2.11
PDX1P52945 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.88□□□□□ -2.11
PDX1P52945 Y_RNA.138-201ENST00000363462 102 ntBASIC1.88□□□□□ -2.11
PDX1P52945 Y_RNA.252-201ENST00000364556 101 ntBASIC1.88□□□□□ -2.11
PDX1P52945 Y_RNA.338-201ENST00000365320 114 ntBASIC1.88□□□□□ -2.11
PDX1P52945 Y_RNA.428-201ENST00000384078 102 ntBASIC1.88□□□□□ -2.11
PDX1P52945 Y_RNA.460-201ENST00000384255 102 ntBASIC1.88□□□□□ -2.11
PDX1P52945 RNU6-975P-201ENST00000384296 105 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms