Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.3□□□□□ -2.46
POLR2JP52435 AL392103.1-201ENST00000447000 198 ntBASIC-0.3□□□□□ -2.46
POLR2JP52435 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.3□□□□□ -2.46
POLR2JP52435 MTCO2P6-201ENST00000463134 685 ntBASIC-0.3□□□□□ -2.46
POLR2JP52435 MTCO2P29-201ENST00000465212 189 ntBASIC-0.3□□□□□ -2.46
POLR2JP52435 AC010587.1-201ENST00000505809 469 ntBASIC-0.3□□□□□ -2.46
POLR2JP52435 RNU7-28P-201ENST00000516759 62 ntBASIC-0.3□□□□□ -2.46
POLR2JP52435 RNA5SP94-201ENST00000516917 108 ntBASIC-0.3□□□□□ -2.46
POLR2JP52435 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.3□□□□□ -2.46
POLR2JP52435 AL592221.1-201ENST00000605266 382 ntBASIC-0.3□□□□□ -2.46
POLR2JP52435 AL031667.3-201ENST00000620124 655 ntBASIC-0.3□□□□□ -2.46
POLR2JP52435 AC068792.1-201ENST00000621354 417 ntBASIC-0.3□□□□□ -2.46
POLR2JP52435 SNORD115-7-201ENST00000365306 82 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 SNORA2B-201ENST00000384583 137 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 RPL22P17-201ENST00000438729 315 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.31□□□□□ -2.46
POLR2JP52435 RPS3AP17-201ENST00000472594 777 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.31□□□□□ -2.46
POLR2JP52435 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.31□□□□□ -2.46
POLR2JP52435 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 RNU6-323P-201ENST00000521915 107 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 AC141557.1-201ENST00000540982 400 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 MIR1273G-201ENST00000577677 100 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 AC068790.2-201ENST00000602601 557 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.31□□□□□ -2.46
POLR2JP52435 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
POLR2JP52435 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.32□□□□□ -2.46
POLR2JP52435 RNU6-179P-201ENST00000363350 107 ntBASIC-0.32□□□□□ -2.46
POLR2JP52435 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.32□□□□□ -2.46
POLR2JP52435 SNORA75.6-201ENST00000391318 127 ntBASIC-0.32□□□□□ -2.46
POLR2JP52435 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.32□□□□□ -2.46
POLR2JP52435 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.32□□□□□ -2.46
POLR2JP52435 HSFY5P-201ENST00000453726 309 ntBASIC-0.32□□□□□ -2.46
POLR2JP52435 AC007215.1-201ENST00000464893 276 ntBASIC-0.32□□□□□ -2.46
POLR2JP52435 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.32□□□□□ -2.46
POLR2JP52435 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.32□□□□□ -2.46
POLR2JP52435 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.32□□□□□ -2.46
POLR2JP52435 AL121992.2-201ENST00000606262 256 ntBASIC-0.32□□□□□ -2.46
POLR2JP52435 MIR8087-201ENST00000612745 78 ntBASIC-0.32□□□□□ -2.46
POLR2JP52435 AC139792.3-201ENST00000623525 224 ntBASIC-0.32□□□□□ -2.46
POLR2JP52435 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 RNU6-833P-201ENST00000363486 107 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 SNORD114-26-201ENST00000363543 72 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 RNU6-809P-201ENST00000384461 107 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.33□□□□□ -2.46
POLR2JP52435 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.33□□□□□ -2.46
POLR2JP52435 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.33□□□□□ -2.46
POLR2JP52435 AC010493.1-201ENST00000513479 292 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.33□□□□□ -2.46
POLR2JP52435 RNU6-430P-201ENST00000517078 107 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 SNORA25.17-201ENST00000517184 124 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.33□□□□□ -2.46
POLR2JP52435 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.33□□□□□ -2.46
POLR2JP52435 MIR3678-201ENST00000578455 94 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 MIR548AO-201ENST00000579992 96 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 AC010620.1-201ENST00000601088 1102 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 AC025449.1-201ENST00000603896 529 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 AC073544.1-201ENST00000600110 1595 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 ZNF204P-201ENST00000416749 2397 ntBASIC-0.33□□□□□ -2.46
POLR2JP52435 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
POLR2JP52435 SNORA1B-201ENST00000362535 133 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 SNORA8.2-201ENST00000384372 139 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 MIR520C-201ENST00000385005 87 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 RNU6-550P-201ENST00000391057 101 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 SNORD115.1-201ENST00000391109 76 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 MIR891A-201ENST00000401237 79 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 AL590632.1-201ENST00000424289 371 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 MTCO2P23-201ENST00000425216 680 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 AL358176.2-201ENST00000425769 204 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 AC119618.1-201ENST00000434191 222 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 RNU2-56P-201ENST00000516826 190 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 RNU1-117P-201ENST00000517041 158 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 RNU6-58P-201ENST00000517143 103 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.34□□□□□ -2.46
POLR2JP52435 AP003181.2-201ENST00000528941 181 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 AC104383.1-201ENST00000530297 370 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.34□□□□□ -2.46
POLR2JP52435 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.34□□□□□ -2.46
POLR2JP52435 MIR4438-201ENST00000585271 93 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 AC080013.3-201ENST00000606839 578 ntBASIC-0.34□□□□□ -2.46
POLR2JP52435 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.35□□□□□ -2.46
POLR2JP52435 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 MIR145-201ENST00000384967 88 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 RNA5SP482-201ENST00000391269 118 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 MIR1185-2-201ENST00000408687 86 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.35□□□□□ -2.47
POLR2JP52435 AL353997.1-201ENST00000432936 108 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.35□□□□□ -2.47
POLR2JP52435 AC116562.3-201ENST00000506136 177 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 AC092436.3-201ENST00000511788 257 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 SNORA40.12-201ENST00000516329 111 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 RNU6-344P-201ENST00000516635 111 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 SNORA74.3-201ENST00000517108 154 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.35□□□□□ -2.47
POLR2JP52435 AC068587.5-201ENST00000528506 175 ntBASIC-0.35□□□□□ -2.47
POLR2JP52435 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.35□□□□□ -2.47
POLR2JP52435 AC010999.1-201ENST00000611856 324 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms