Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-1240P-201ENST00000365155 104 ntBASIC2.4□□□□□ -2.03
NEK3P51956 Y_RNA.535-201ENST00000384612 99 ntBASIC2.4□□□□□ -2.03
NEK3P51956 AC060773.1-201ENST00000421698 310 ntBASIC2.4□□□□□ -2.03
NEK3P51956 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.4□□□□□ -2.03
NEK3P51956 Y_RNA.639-201ENST00000458981 102 ntBASIC2.4□□□□□ -2.03
NEK3P51956 TRBV12-1-201ENST00000479785 344 ntBASIC2.4□□□□□ -2.03
NEK3P51956 YWHAEP4-201ENST00000505390 198 ntBASIC2.4□□□□□ -2.03
NEK3P51956 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.4□□□□□ -2.03
NEK3P51956 AC026436.1-201ENST00000510537 270 ntBASIC2.4□□□□□ -2.03
NEK3P51956 IGLV3-17-201ENST00000519099 244 ntBASIC2.4□□□□□ -2.03
NEK3P51956 AC090971.5-201ENST00000621102 293 ntBASIC2.4□□□□□ -2.03
NEK3P51956 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.4□□□□□ -2.03
NEK3P51956 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
NEK3P51956 Y_RNA.5-201ENST00000362334 102 ntBASIC2.39□□□□□ -2.03
NEK3P51956 SNORD12B-201ENST00000410433 91 ntBASIC2.39□□□□□ -2.03
NEK3P51956 CST2P1-201ENST00000425770 87 ntBASIC2.39□□□□□ -2.03
NEK3P51956 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.39□□□□□ -2.03
NEK3P51956 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.39□□□□□ -2.03
NEK3P51956 MIR3945-201ENST00000581853 98 ntBASIC2.39□□□□□ -2.03
NEK3P51956 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.39□□□□□ -2.03
NEK3P51956 AC046143.2-201ENST00000609789 160 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.15-201ENST00000611544 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.16-201ENST00000613119 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.12-201ENST00000613778 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.20-201ENST00000613956 192 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.9-201ENST00000615427 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.11-201ENST00000616345 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.2-201ENST00000616535 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.3-201ENST00000617785 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.19-201ENST00000618602 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 RNU2-1-201ENST00000618664 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.6-201ENST00000619225 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.5-201ENST00000619465 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 U2.10-201ENST00000620268 191 ntBASIC2.39□□□□□ -2.03
NEK3P51956 Y_RNA.27-201ENST00000362540 103 ntBASIC2.38□□□□□ -2.03
NEK3P51956 snoU2-30.2-201ENST00000362805 70 ntBASIC2.38□□□□□ -2.03
NEK3P51956 SNORD114-30-201ENST00000364448 72 ntBASIC2.38□□□□□ -2.03
NEK3P51956 SNORA72.2-201ENST00000365028 127 ntBASIC2.38□□□□□ -2.03
NEK3P51956 SNORD42.2-201ENST00000365570 69 ntBASIC2.38□□□□□ -2.03
NEK3P51956 RNU6-1310P-201ENST00000384153 107 ntBASIC2.38□□□□□ -2.03
NEK3P51956 Y_RNA.498-201ENST00000384460 102 ntBASIC2.38□□□□□ -2.03
NEK3P51956 SNORA8-201ENST00000384574 139 ntBASIC2.38□□□□□ -2.03
NEK3P51956 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
NEK3P51956 AL356379.1-201ENST00000414105 126 ntBASIC2.38□□□□□ -2.03
NEK3P51956 AL135786.1-201ENST00000415892 214 ntBASIC2.38□□□□□ -2.03
NEK3P51956 FCF1P4-201ENST00000448326 183 ntBASIC2.38□□□□□ -2.03
NEK3P51956 SNORA40.9-201ENST00000515895 93 ntBASIC2.38□□□□□ -2.03
NEK3P51956 RNU6-475P-201ENST00000516073 104 ntBASIC2.38□□□□□ -2.03
NEK3P51956 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
NEK3P51956 AC018448.1-201ENST00000552843 316 ntBASIC2.38□□□□□ -2.03
NEK3P51956 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.38□□□□□ -2.03
NEK3P51956 AC069114.2-201ENST00000604699 304 ntBASIC2.38□□□□□ -2.03
NEK3P51956 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.38□□□□□ -2.03
NEK3P51956 AL773524.1-201ENST00000614065 229 ntBASIC2.38□□□□□ -2.03
NEK3P51956 AL162373.1-201ENST00000620433 407 ntBASIC2.38□□□□□ -2.03
NEK3P51956 AC006435.5-201ENST00000624486 112 ntBASIC2.38□□□□□ -2.03
NEK3P51956 AC022513.1-201ENST00000624512 117 ntBASIC2.38□□□□□ -2.03
NEK3P51956 MIR4272-201ENST00000635924 64 ntBASIC2.38□□□□□ -2.03
NEK3P51956 Y_RNA.526-201ENST00000384572 110 ntBASIC2.37□□□□□ -2.03
NEK3P51956 SNORD78.2-201ENST00000391076 69 ntBASIC2.37□□□□□ -2.03
NEK3P51956 SNORA3.2-201ENST00000408221 125 ntBASIC2.37□□□□□ -2.03
NEK3P51956 MIR1253-201ENST00000408273 105 ntBASIC2.37□□□□□ -2.03
NEK3P51956 ELOCP21-201ENST00000412558 336 ntBASIC2.37□□□□□ -2.03
NEK3P51956 AC244636.1-201ENST00000421152 228 ntBASIC2.37□□□□□ -2.03
NEK3P51956 OOSP1P1-201ENST00000423265 274 ntBASIC2.37□□□□□ -2.03
NEK3P51956 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.37□□□□□ -2.03
NEK3P51956 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.37□□□□□ -2.03
NEK3P51956 RNU7-169P-201ENST00000459456 61 ntBASIC2.37□□□□□ -2.03
NEK3P51956 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.37□□□□□ -2.03
NEK3P51956 SNORA40.14-201ENST00000516543 86 ntBASIC2.37□□□□□ -2.03
NEK3P51956 RNU6-107P-201ENST00000516643 102 ntBASIC2.37□□□□□ -2.03
NEK3P51956 SNRPGP18-201ENST00000553000 214 ntBASIC2.37□□□□□ -2.03
NEK3P51956 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.37□□□□□ -2.03
NEK3P51956 AC092447.9-201ENST00000603395 144 ntBASIC2.37□□□□□ -2.03
NEK3P51956 MIR338-201ENST00000636369 67 ntBASIC2.37□□□□□ -2.03
NEK3P51956 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NEK3P51956 ZNF658B-202ENST00000615961 3375 ntBASIC2.36□□□□□ -2.03
NEK3P51956 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
NEK3P51956 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NEK3P51956 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NEK3P51956 AL596028.1-201ENST00000326971 197 ntBASIC2.36□□□□□ -2.03
NEK3P51956 SNORA70B-201ENST00000384210 135 ntBASIC2.36□□□□□ -2.03
NEK3P51956 MRPL35P1-201ENST00000404272 572 ntBASIC2.36□□□□□ -2.03
NEK3P51956 AL117342.1-201ENST00000404861 406 ntBASIC2.36□□□□□ -2.03
NEK3P51956 AC069257.2-201ENST00000441819 155 ntBASIC2.36□□□□□ -2.03
NEK3P51956 AL137792.2-201ENST00000443484 235 ntBASIC2.36□□□□□ -2.03
NEK3P51956 SUMO1P2-201ENST00000452524 304 ntBASIC2.36□□□□□ -2.03
NEK3P51956 RNU6-625P-201ENST00000459412 107 ntBASIC2.36□□□□□ -2.03
NEK3P51956 Y_RNA.661-201ENST00000516003 99 ntBASIC2.36□□□□□ -2.03
NEK3P51956 RNU6-1041P-201ENST00000516254 102 ntBASIC2.36□□□□□ -2.03
NEK3P51956 RNA5SP281-201ENST00000516504 135 ntBASIC2.36□□□□□ -2.03
NEK3P51956 AC022432.1-201ENST00000595739 310 ntBASIC2.36□□□□□ -2.03
NEK3P51956 AC006001.4-201ENST00000622243 395 ntBASIC2.36□□□□□ -2.03
NEK3P51956 AL606534.2-204ENST00000635008 178 ntBASIC2.36□□□□□ -2.03
NEK3P51956 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NEK3P51956 Y_RNA.11-201ENST00000362375 109 ntBASIC2.35□□□□□ -2.03
NEK3P51956 RNA5SP276-201ENST00000362580 94 ntBASIC2.35□□□□□ -2.03
NEK3P51956 Y_RNA.496-201ENST00000384444 101 ntBASIC2.35□□□□□ -2.03
NEK3P51956 RNA5SP425-201ENST00000410336 112 ntBASIC2.35□□□□□ -2.03
NEK3P51956 AC009310.1-201ENST00000414414 451 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms