Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU4-17P-201ENST00000365598 141 ntBASIC2.78□□□□□ -1.96
CLK3P49761 Y_RNA.412-201ENST00000384001 104 ntBASIC2.78□□□□□ -1.96
CLK3P49761 AL133475.1-201ENST00000404414 305 ntBASIC2.78□□□□□ -1.96
CLK3P49761 MIR320B2-201ENST00000408479 138 ntBASIC2.78□□□□□ -1.96
CLK3P49761 RN7SKP220-201ENST00000410611 288 ntBASIC2.78□□□□□ -1.96
CLK3P49761 RNU6-735P-201ENST00000410612 107 ntBASIC2.78□□□□□ -1.96
CLK3P49761 AC009963.1-201ENST00000417265 157 ntBASIC2.78□□□□□ -1.96
CLK3P49761 AC019205.3-201ENST00000424573 156 ntBASIC2.78□□□□□ -1.96
CLK3P49761 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.78□□□□□ -1.96
CLK3P49761 Z96811.1-201ENST00000445880 108 ntBASIC2.78□□□□□ -1.96
CLK3P49761 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.78□□□□□ -1.96
CLK3P49761 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.78□□□□□ -1.96
CLK3P49761 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.78□□□□□ -1.96
CLK3P49761 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.78□□□□□ -1.96
CLK3P49761 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.78□□□□□ -1.96
CLK3P49761 MIR3674-201ENST00000636576 68 ntBASIC2.78□□□□□ -1.96
CLK3P49761 AC002543.1-201ENST00000299783 1954 ntBASIC2.78□□□□□ -1.97
CLK3P49761 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.78□□□□□ -1.97
CLK3P49761 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLK3P49761 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLK3P49761 AC073325.2-201ENST00000339545 159 ntBASIC2.77□□□□□ -1.97
CLK3P49761 Y_RNA.215-201ENST00000364204 112 ntBASIC2.77□□□□□ -1.97
CLK3P49761 RNU6-1168P-201ENST00000390831 104 ntBASIC2.77□□□□□ -1.97
CLK3P49761 Y_RNA.586-201ENST00000391146 98 ntBASIC2.77□□□□□ -1.97
CLK3P49761 SNORD88.1-201ENST00000408684 91 ntBASIC2.77□□□□□ -1.97
CLK3P49761 RNU2-2P-201ENST00000410396 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 RNA5SP475-201ENST00000410568 110 ntBASIC2.77□□□□□ -1.97
CLK3P49761 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.77□□□□□ -1.97
CLK3P49761 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.77□□□□□ -1.97
CLK3P49761 AC090525.1-201ENST00000479116 478 ntBASIC2.77□□□□□ -1.97
CLK3P49761 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.77□□□□□ -1.97
CLK3P49761 AC008885.1-201ENST00000514930 301 ntBASIC2.77□□□□□ -1.97
CLK3P49761 SNORA31.16-201ENST00000516773 139 ntBASIC2.77□□□□□ -1.97
CLK3P49761 RN7SKP57-201ENST00000517248 293 ntBASIC2.77□□□□□ -1.97
CLK3P49761 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.77□□□□□ -1.97
CLK3P49761 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.77□□□□□ -1.97
CLK3P49761 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.77□□□□□ -1.97
CLK3P49761 CYP4A27P-201ENST00000567218 190 ntBASIC2.77□□□□□ -1.97
CLK3P49761 AC009127.3-201ENST00000570531 403 ntBASIC2.77□□□□□ -1.97
CLK3P49761 MIR3136-201ENST00000583498 78 ntBASIC2.77□□□□□ -1.97
CLK3P49761 RPS15AP11-201ENST00000594193 385 ntBASIC2.77□□□□□ -1.97
CLK3P49761 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.77□□□□□ -1.97
CLK3P49761 RNU2-4P-201ENST00000606190 192 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.15-201ENST00000611544 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.16-201ENST00000613119 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.12-201ENST00000613778 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 AC005520.5-201ENST00000613926 164 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.9-201ENST00000615427 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.11-201ENST00000616345 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.2-201ENST00000616535 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.3-201ENST00000617785 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.19-201ENST00000618602 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 RNU2-1-201ENST00000618664 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.6-201ENST00000619225 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.5-201ENST00000619465 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 U2.10-201ENST00000620268 191 ntBASIC2.77□□□□□ -1.97
CLK3P49761 MIR8057-201ENST00000620957 69 ntBASIC2.77□□□□□ -1.97
CLK3P49761 AC007318.2-201ENST00000620999 243 ntBASIC2.77□□□□□ -1.97
CLK3P49761 MIR7515-201ENST00000637837 67 ntBASIC2.77□□□□□ -1.97
CLK3P49761 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLK3P49761 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLK3P49761 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CLK3P49761 RNA5SP374-201ENST00000362939 125 ntBASIC2.76□□□□□ -1.97
CLK3P49761 Y_RNA.182-201ENST00000363880 111 ntBASIC2.76□□□□□ -1.97
CLK3P49761 RNU6-851P-201ENST00000384565 107 ntBASIC2.76□□□□□ -1.97
CLK3P49761 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.76□□□□□ -1.97
CLK3P49761 Z98742.2-201ENST00000431564 187 ntBASIC2.76□□□□□ -1.97
CLK3P49761 SEPT7P4-201ENST00000437076 306 ntBASIC2.76□□□□□ -1.97
CLK3P49761 UBBP3-201ENST00000445497 241 ntBASIC2.76□□□□□ -1.97
CLK3P49761 Y_RNA.637-201ENST00000459424 114 ntBASIC2.76□□□□□ -1.97
CLK3P49761 RPL36AP48-201ENST00000485521 314 ntBASIC2.76□□□□□ -1.97
CLK3P49761 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.76□□□□□ -1.97
CLK3P49761 RNU6-826P-201ENST00000516827 104 ntBASIC2.76□□□□□ -1.97
CLK3P49761 AP002001.1-203ENST00000534002 267 ntBASIC2.76□□□□□ -1.97
CLK3P49761 MIR3684-201ENST00000579779 74 ntBASIC2.76□□□□□ -1.97
CLK3P49761 MIR4765-201ENST00000585007 77 ntBASIC2.76□□□□□ -1.97
CLK3P49761 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.76□□□□□ -1.97
CLK3P49761 AC091953.5-201ENST00000622919 233 ntBASIC2.76□□□□□ -1.97
CLK3P49761 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLK3P49761 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.76□□□□□ -1.97
CLK3P49761 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLK3P49761 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.76□□□□□ -1.97
CLK3P49761 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLK3P49761 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.75□□□□□ -1.97
CLK3P49761 SNORD114-19-201ENST00000363072 75 ntBASIC2.75□□□□□ -1.97
CLK3P49761 VTRNA1-1-201ENST00000363120 99 ntBASIC2.75□□□□□ -1.97
CLK3P49761 SNORA68.1-201ENST00000364537 132 ntBASIC2.75□□□□□ -1.97
CLK3P49761 Y_RNA.333-201ENST00000365274 102 ntBASIC2.75□□□□□ -1.97
CLK3P49761 RNU1-109P-201ENST00000383960 147 ntBASIC2.75□□□□□ -1.97
CLK3P49761 SNORA18.3-201ENST00000384122 132 ntBASIC2.75□□□□□ -1.97
CLK3P49761 SNORA22C-201ENST00000384614 134 ntBASIC2.75□□□□□ -1.97
CLK3P49761 AL139095.1-201ENST00000404326 391 ntBASIC2.75□□□□□ -1.97
CLK3P49761 CYCSP48-201ENST00000417124 323 ntBASIC2.75□□□□□ -1.97
CLK3P49761 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.75□□□□□ -1.97
CLK3P49761 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLK3P49761 SNORD116-25-201ENST00000516517 92 ntBASIC2.75□□□□□ -1.97
CLK3P49761 AC105137.2-201ENST00000569073 466 ntBASIC2.75□□□□□ -1.97
CLK3P49761 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.75□□□□□ -1.97
CLK3P49761 AC006380.1-201ENST00000603598 186 ntBASIC2.75□□□□□ -1.97
CLK3P49761 SNRPGP20-201ENST00000604477 205 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms