Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 Y_RNA.136-201ENST00000363444 102 ntBASIC2.58□□□□□ -2
MMP13P45452 RNU6-727P-201ENST00000363592 107 ntBASIC2.58□□□□□ -2
MMP13P45452 Y_RNA.331-201ENST00000365267 102 ntBASIC2.58□□□□□ -2
MMP13P45452 RNU1-109P-201ENST00000383960 147 ntBASIC2.58□□□□□ -2
MMP13P45452 RNU6-1289P-201ENST00000384431 106 ntBASIC2.58□□□□□ -2
MMP13P45452 RNU6-125P-201ENST00000384505 107 ntBASIC2.58□□□□□ -2
MMP13P45452 SNORA53-201ENST00000391141 249 ntBASIC2.58□□□□□ -2
MMP13P45452 AIMP1P2-201ENST00000425294 312 ntBASIC2.58□□□□□ -2
MMP13P45452 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.58□□□□□ -2
MMP13P45452 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.58□□□□□ -2
MMP13P45452 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.58□□□□□ -2
MMP13P45452 SNORA31.11-201ENST00000516528 139 ntBASIC2.58□□□□□ -2
MMP13P45452 RNU6-1212P-201ENST00000517023 104 ntBASIC2.58□□□□□ -2
MMP13P45452 AL137100.2-201ENST00000555786 315 ntBASIC2.58□□□□□ -2
MMP13P45452 AC233702.2-202ENST00000562547 291 ntBASIC2.58□□□□□ -2
MMP13P45452 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.58□□□□□ -2
MMP13P45452 MIR3133-201ENST00000583157 78 ntBASIC2.58□□□□□ -2
MMP13P45452 AC005176.2-201ENST00000596933 147 ntBASIC2.58□□□□□ -2
MMP13P45452 AC091932.3-201ENST00000624223 323 ntBASIC2.58□□□□□ -2
MMP13P45452 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.58□□□□□ -2
MMP13P45452 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
MMP13P45452 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
MMP13P45452 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
MMP13P45452 AL109809.4-201ENST00000603520 2185 ntBASIC2.57□□□□□ -2
MMP13P45452 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.57□□□□□ -2
MMP13P45452 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MMP13P45452 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
MMP13P45452 AC080100.1-201ENST00000624239 5356 ntBASIC2.57□□□□□ -2
MMP13P45452 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MMP13P45452 AC068700.1-201ENST00000565862 3754 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.82-201ENST00000363000 102 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.92-201ENST00000363043 102 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.230-201ENST00000364348 109 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.235-201ENST00000364412 102 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.306-201ENST00000365015 102 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.312-201ENST00000365089 102 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.322-201ENST00000365151 102 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.464-201ENST00000384282 110 ntBASIC2.57□□□□□ -2
MMP13P45452 MIR27B-201ENST00000385129 97 ntBASIC2.57□□□□□ -2
MMP13P45452 RNU6-918P-201ENST00000391219 106 ntBASIC2.57□□□□□ -2
MMP13P45452 CBX3P9-201ENST00000402326 552 ntBASIC2.57□□□□□ -2
MMP13P45452 RNA5SP201-201ENST00000410316 124 ntBASIC2.57□□□□□ -2
MMP13P45452 RAB28P5-201ENST00000427490 651 ntBASIC2.57□□□□□ -2
MMP13P45452 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.57□□□□□ -2
MMP13P45452 IFNA11P-201ENST00000446352 526 ntBASIC2.57□□□□□ -2
MMP13P45452 UQCRBP2-201ENST00000447827 297 ntBASIC2.57□□□□□ -2
MMP13P45452 AC007395.1-201ENST00000451333 677 ntBASIC2.57□□□□□ -2
MMP13P45452 SNORD2.1-201ENST00000458762 69 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.650-201ENST00000459002 102 ntBASIC2.57□□□□□ -2
MMP13P45452 AIG1P1-201ENST00000503376 148 ntBASIC2.57□□□□□ -2
MMP13P45452 SNORA27.4-201ENST00000516650 95 ntBASIC2.57□□□□□ -2
MMP13P45452 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.777-201ENST00000516982 102 ntBASIC2.57□□□□□ -2
MMP13P45452 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.57□□□□□ -2
MMP13P45452 AC018448.1-201ENST00000552843 316 ntBASIC2.57□□□□□ -2
MMP13P45452 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.771-201ENST00000598668 102 ntBASIC2.57□□□□□ -2
MMP13P45452 AL138963.2-201ENST00000605137 226 ntBASIC2.57□□□□□ -2
MMP13P45452 Y_RNA.789-201ENST00000622480 102 ntBASIC2.57□□□□□ -2
MMP13P45452 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.57□□□□□ -2
MMP13P45452 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.57□□□□□ -2
MMP13P45452 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
MMP13P45452 AC010329.5-201ENST00000623497 2174 ntBASIC2.57□□□□□ -2
MMP13P45452 BX322639.1-202ENST00000423987 2213 ntBASIC2.57□□□□□ -2
MMP13P45452 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
MMP13P45452 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
MMP13P45452 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.56□□□□□ -2
MMP13P45452 SNORA25.1-201ENST00000362326 128 ntBASIC2.56□□□□□ -2
MMP13P45452 RNU4-15P-201ENST00000362613 141 ntBASIC2.56□□□□□ -2
MMP13P45452 RNU6-1159P-201ENST00000362933 107 ntBASIC2.56□□□□□ -2
MMP13P45452 RNU4-80P-201ENST00000363200 141 ntBASIC2.56□□□□□ -2
MMP13P45452 Y_RNA.217-201ENST00000364214 105 ntBASIC2.56□□□□□ -2
MMP13P45452 RNU6-454P-201ENST00000364292 107 ntBASIC2.56□□□□□ -2
MMP13P45452 Y_RNA.506-201ENST00000384494 102 ntBASIC2.56□□□□□ -2
MMP13P45452 SNORA80E-201ENST00000384744 137 ntBASIC2.56□□□□□ -2
MMP13P45452 Y_RNA.595-201ENST00000410403 105 ntBASIC2.56□□□□□ -2
MMP13P45452 RNU2-61P-201ENST00000411069 191 ntBASIC2.56□□□□□ -2
MMP13P45452 PTGES3P4-201ENST00000426243 356 ntBASIC2.56□□□□□ -2
MMP13P45452 RNU6-625P-201ENST00000459412 107 ntBASIC2.56□□□□□ -2
MMP13P45452 Y_RNA.641-201ENST00000459414 105 ntBASIC2.56□□□□□ -2
MMP13P45452 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.56□□□□□ -2
MMP13P45452 SCARNA17.1-201ENST00000516211 143 ntBASIC2.56□□□□□ -2
MMP13P45452 SCARNA17.2-201ENST00000516334 143 ntBASIC2.56□□□□□ -2
MMP13P45452 RNA5SP54-201ENST00000516951 92 ntBASIC2.56□□□□□ -2
MMP13P45452 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.56□□□□□ -2
MMP13P45452 MIR4308-201ENST00000580634 81 ntBASIC2.56□□□□□ -2
MMP13P45452 RPS15AP11-201ENST00000594193 385 ntBASIC2.56□□□□□ -2
MMP13P45452 AC005828.6-201ENST00000606610 232 ntBASIC2.56□□□□□ -2
MMP13P45452 AC005520.5-201ENST00000613926 164 ntBASIC2.56□□□□□ -2
MMP13P45452 SCARNA17.4-201ENST00000614296 143 ntBASIC2.56□□□□□ -2
MMP13P45452 AC004467.1-201ENST00000615678 330 ntBASIC2.56□□□□□ -2
MMP13P45452 AC021753.1-201ENST00000635724 168 ntBASIC2.56□□□□□ -2
MMP13P45452 MIR7515-201ENST00000637837 67 ntBASIC2.56□□□□□ -2
MMP13P45452 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
MMP13P45452 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
MMP13P45452 AC010889.1-201ENST00000566193 2666 ntBASIC2.55□□□□□ -2
MMP13P45452 Y_RNA.179-201ENST00000363844 90 ntBASIC2.55□□□□□ -2
MMP13P45452 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
MMP13P45452 RNU6-923P-201ENST00000364753 107 ntBASIC2.55□□□□□ -2
MMP13P45452 RNU6-1083P-201ENST00000384022 107 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms