Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MIR7844-201ENST00000616161 122 ntBASIC-0.66□□□□□ -2.52
HTTP42858 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.67□□□□□ -2.52
HTTP42858 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.67□□□□□ -2.52
HTTP42858 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.67□□□□□ -2.52
HTTP42858 LRRC6P1-201ENST00000532188 885 ntBASIC-0.67□□□□□ -2.52
HTTP42858 MIR5706-201ENST00000579841 80 ntBASIC-0.67□□□□□ -2.52
HTTP42858 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.67□□□□□ -2.52
HTTP42858 AL359999.1-201ENST00000604513 294 ntBASIC-0.67□□□□□ -2.52
HTTP42858 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
HTTP42858 AC084368.1-201ENST00000620935 65 ntBASIC-0.67□□□□□ -2.52
HTTP42858 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.67□□□□□ -2.52
HTTP42858 MIR873-201ENST00000401120 77 ntBASIC-0.67□□□□□ -2.52
HTTP42858 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.67□□□□□ -2.52
HTTP42858 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.67□□□□□ -2.52
HTTP42858 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-0.67□□□□□ -2.52
HTTP42858 AC125232.2-201ENST00000592457 143 ntBASIC-0.67□□□□□ -2.52
HTTP42858 RPL17P51-201ENST00000605218 238 ntBASIC-0.67□□□□□ -2.52
HTTP42858 U6.108-201ENST00000637764 58 ntBASIC-0.67□□□□□ -2.52
HTTP42858 RNU1-76P-201ENST00000362903 159 ntBASIC-0.67□□□□□ -2.52
HTTP42858 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.67□□□□□ -2.52
HTTP42858 RNU6-47P-201ENST00000383866 107 ntBASIC-0.67□□□□□ -2.52
HTTP42858 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.67□□□□□ -2.52
HTTP42858 MTND3P17-201ENST00000416968 344 ntBASIC-0.67□□□□□ -2.52
HTTP42858 RNU6-287P-201ENST00000516230 98 ntBASIC-0.67□□□□□ -2.52
HTTP42858 AC011451.2-201ENST00000604303 598 ntBASIC-0.67□□□□□ -2.52
HTTP42858 AL359075.3-201ENST00000613288 217 ntBASIC-0.67□□□□□ -2.52
HTTP42858 FRG1KP-201ENST00000623592 341 ntBASIC-0.67□□□□□ -2.52
HTTP42858 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
HTTP42858 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.68□□□□□ -2.52
HTTP42858 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.68□□□□□ -2.52
HTTP42858 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.68□□□□□ -2.52
HTTP42858 snoU13.8-201ENST00000458890 104 ntBASIC-0.68□□□□□ -2.52
HTTP42858 AP000870.1-201ENST00000472927 406 ntBASIC-0.68□□□□□ -2.52
HTTP42858 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.68□□□□□ -2.52
HTTP42858 AC112206.4-201ENST00000515142 405 ntBASIC-0.68□□□□□ -2.52
HTTP42858 SNORA18.4-201ENST00000516440 124 ntBASIC-0.68□□□□□ -2.52
HTTP42858 AC091163.3-201ENST00000518269 1144 ntBASIC-0.68□□□□□ -2.52
HTTP42858 AC023632.1-201ENST00000518463 375 ntBASIC-0.68□□□□□ -2.52
HTTP42858 AC134878.1-201ENST00000619901 243 ntBASIC-0.68□□□□□ -2.52
HTTP42858 AL356094.1-201ENST00000624663 1212 ntBASIC-0.68□□□□□ -2.52
HTTP42858 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.68□□□□□ -2.52
HTTP42858 RNA5SP117-201ENST00000365294 118 ntBASIC-0.68□□□□□ -2.52
HTTP42858 CCDC58P2-201ENST00000417131 366 ntBASIC-0.68□□□□□ -2.52
HTTP42858 MLLT10P1-201ENST00000418346 262 ntBASIC-0.68□□□□□ -2.52
HTTP42858 AL365184.2-201ENST00000431139 435 ntBASIC-0.68□□□□□ -2.52
HTTP42858 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.68□□□□□ -2.52
HTTP42858 ZNF971P-201ENST00000562068 1249 ntBASIC-0.68□□□□□ -2.52
HTTP42858 MIR4639-201ENST00000584938 69 ntBASIC-0.68□□□□□ -2.52
HTTP42858 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
HTTP42858 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.69□□□□□ -2.52
HTTP42858 RNY4P28-201ENST00000365281 93 ntBASIC-0.69□□□□□ -2.52
HTTP42858 RNU6-975P-201ENST00000384296 105 ntBASIC-0.69□□□□□ -2.52
HTTP42858 MIR125B2-201ENST00000385128 89 ntBASIC-0.69□□□□□ -2.52
HTTP42858 SNORD100-201ENST00000408573 76 ntBASIC-0.69□□□□□ -2.52
HTTP42858 AL122001.1-201ENST00000457027 370 ntBASIC-0.69□□□□□ -2.52
HTTP42858 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.69□□□□□ -2.52
HTTP42858 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.69□□□□□ -2.52
HTTP42858 SNORA33-201ENST00000363664 130 ntBASIC-0.69□□□□□ -2.52
HTTP42858 RNU6-432P-201ENST00000384196 109 ntBASIC-0.69□□□□□ -2.52
HTTP42858 RNU6-658P-201ENST00000384606 106 ntBASIC-0.69□□□□□ -2.52
HTTP42858 AC019178.2-201ENST00000423595 505 ntBASIC-0.69□□□□□ -2.52
HTTP42858 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.69□□□□□ -2.52
HTTP42858 AC010153.1-201ENST00000432862 727 ntBASIC-0.69□□□□□ -2.52
HTTP42858 FCF1P4-201ENST00000448326 183 ntBASIC-0.69□□□□□ -2.52
HTTP42858 RNU6-528P-201ENST00000516926 100 ntBASIC-0.69□□□□□ -2.52
HTTP42858 SUMO2P14-201ENST00000604488 293 ntBASIC-0.69□□□□□ -2.52
HTTP42858 RNU6-364P-201ENST00000384387 107 ntBASIC-0.69□□□□□ -2.52
HTTP42858 RNU6-932P-201ENST00000391108 106 ntBASIC-0.69□□□□□ -2.52
HTTP42858 U8.16-201ENST00000391279 133 ntBASIC-0.69□□□□□ -2.52
HTTP42858 RNU4-22P-201ENST00000411058 166 ntBASIC-0.69□□□□□ -2.52
HTTP42858 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.69□□□□□ -2.52
HTTP42858 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.69□□□□□ -2.52
HTTP42858 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.69□□□□□ -2.52
HTTP42858 RNU2-46P-201ENST00000517038 113 ntBASIC-0.69□□□□□ -2.52
HTTP42858 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.69□□□□□ -2.52
HTTP42858 SNORA59B-202ENST00000578183 701 ntBASIC-0.69□□□□□ -2.52
HTTP42858 BNIP3P30-201ENST00000601184 574 ntBASIC-0.69□□□□□ -2.52
HTTP42858 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.7□□□□□ -2.52
HTTP42858 U8.6-201ENST00000364939 135 ntBASIC-0.7□□□□□ -2.52
HTTP42858 MIR501-201ENST00000390204 84 ntBASIC-0.7□□□□□ -2.52
HTTP42858 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.7□□□□□ -2.52
HTTP42858 PSMA6P3-201ENST00000428242 164 ntBASIC-0.7□□□□□ -2.52
HTTP42858 AC005002.2-201ENST00000438228 269 ntBASIC-0.7□□□□□ -2.52
HTTP42858 RPL39P34-201ENST00000477141 156 ntBASIC-0.7□□□□□ -2.52
HTTP42858 RPS23P5-201ENST00000495419 428 ntBASIC-0.7□□□□□ -2.52
HTTP42858 AC107401.1-201ENST00000503426 685 ntBASIC-0.7□□□□□ -2.52
HTTP42858 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.7□□□□□ -2.52
HTTP42858 RNU1-142P-201ENST00000516682 145 ntBASIC-0.7□□□□□ -2.52
HTTP42858 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.7□□□□□ -2.52
HTTP42858 AL442067.1-201ENST00000613261 223 ntBASIC-0.7□□□□□ -2.52
HTTP42858 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.7□□□□□ -2.52
HTTP42858 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.7□□□□□ -2.52
HTTP42858 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.7□□□□□ -2.52
HTTP42858 AL162376.1-201ENST00000624117 175 ntBASIC-0.7□□□□□ -2.52
HTTP42858 AC027279.3-201ENST00000625055 122 ntBASIC-0.7□□□□□ -2.52
HTTP42858 MTND5P17-201ENST00000418405 1603 ntBASIC-0.7□□□□□ -2.52
HTTP42858 SNORA63C-201ENST00000364578 129 ntBASIC-0.7□□□□□ -2.52
HTTP42858 AC010531.2-201ENST00000465012 153 ntBASIC-0.7□□□□□ -2.52
HTTP42858 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.7□□□□□ -2.52
HTTP42858 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms