Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.87□□□□□ -2.27
RFC3P40938 AP001330.5-201ENST00000607176 411 ntBASIC0.87□□□□□ -2.27
RFC3P40938 SNORD11B-201ENST00000607707 90 ntBASIC0.87□□□□□ -2.27
RFC3P40938 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.87□□□□□ -2.27
RFC3P40938 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
RFC3P40938 Y_RNA.167-201ENST00000363735 109 ntBASIC0.86□□□□□ -2.27
RFC3P40938 SNORD115-8-201ENST00000363856 82 ntBASIC0.86□□□□□ -2.27
RFC3P40938 Y_RNA.796-201ENST00000364268 102 ntBASIC0.86□□□□□ -2.27
RFC3P40938 Y_RNA.799-201ENST00000364992 102 ntBASIC0.86□□□□□ -2.27
RFC3P40938 SNORD115-38-201ENST00000365037 82 ntBASIC0.86□□□□□ -2.27
RFC3P40938 RNU4-20P-201ENST00000365601 151 ntBASIC0.86□□□□□ -2.27
RFC3P40938 RNU6-933P-201ENST00000384424 107 ntBASIC0.86□□□□□ -2.27
RFC3P40938 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.86□□□□□ -2.27
RFC3P40938 RAB28P5-201ENST00000427490 651 ntBASIC0.86□□□□□ -2.27
RFC3P40938 RNU6-956P-201ENST00000458868 103 ntBASIC0.86□□□□□ -2.27
RFC3P40938 RNU6-261P-201ENST00000459506 102 ntBASIC0.86□□□□□ -2.27
RFC3P40938 AC083798.1-201ENST00000472671 131 ntBASIC0.86□□□□□ -2.27
RFC3P40938 UBL5P1-201ENST00000507979 193 ntBASIC0.86□□□□□ -2.27
RFC3P40938 AC091133.4-201ENST00000511142 308 ntBASIC0.86□□□□□ -2.27
RFC3P40938 RN7SKP298-201ENST00000515950 94 ntBASIC0.86□□□□□ -2.27
RFC3P40938 RNU1-117P-201ENST00000517041 158 ntBASIC0.86□□□□□ -2.27
RFC3P40938 AC004584.2-201ENST00000570407 410 ntBASIC0.86□□□□□ -2.27
RFC3P40938 AL513534.2-201ENST00000603836 250 ntBASIC0.86□□□□□ -2.27
RFC3P40938 AC121247.2-201ENST00000604776 136 ntBASIC0.86□□□□□ -2.27
RFC3P40938 AC092807.2-201ENST00000609367 243 ntBASIC0.86□□□□□ -2.27
RFC3P40938 MIR6788-201ENST00000618842 66 ntBASIC0.86□□□□□ -2.27
RFC3P40938 Z69908.1-201ENST00000622603 247 ntBASIC0.86□□□□□ -2.27
RFC3P40938 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RFC3P40938 MIR19B1-201ENST00000384829 87 ntBASIC0.85□□□□□ -2.27
RFC3P40938 MIR487A-201ENST00000385009 80 ntBASIC0.85□□□□□ -2.27
RFC3P40938 EIF4E2P1-201ENST00000393781 255 ntBASIC0.85□□□□□ -2.27
RFC3P40938 MRPL42P3-201ENST00000401492 326 ntBASIC0.85□□□□□ -2.27
RFC3P40938 MTCO1P20-201ENST00000425366 358 ntBASIC0.85□□□□□ -2.27
RFC3P40938 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.85□□□□□ -2.27
RFC3P40938 AC005002.2-201ENST00000438228 269 ntBASIC0.85□□□□□ -2.27
RFC3P40938 NDUFB4P10-201ENST00000452541 359 ntBASIC0.85□□□□□ -2.27
RFC3P40938 AC092991.1-201ENST00000477176 376 ntBASIC0.85□□□□□ -2.27
RFC3P40938 AC103851.1-201ENST00000506833 274 ntBASIC0.85□□□□□ -2.27
RFC3P40938 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.85□□□□□ -2.27
RFC3P40938 SNORA70.22-201ENST00000517160 124 ntBASIC0.85□□□□□ -2.27
RFC3P40938 RNU7-128P-201ENST00000517247 62 ntBASIC0.85□□□□□ -2.27
RFC3P40938 AC104383.1-201ENST00000530297 370 ntBASIC0.85□□□□□ -2.27
RFC3P40938 MIR5695-201ENST00000579717 85 ntBASIC0.85□□□□□ -2.27
RFC3P40938 MIR151B-201ENST00000584249 96 ntBASIC0.85□□□□□ -2.27
RFC3P40938 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
RFC3P40938 AL133215.3-201ENST00000609801 448 ntBASIC0.85□□□□□ -2.27
RFC3P40938 AL513423.1-201ENST00000621695 132 ntBASIC0.85□□□□□ -2.27
RFC3P40938 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.84□□□□□ -2.27
RFC3P40938 RNU6-440P-201ENST00000390882 105 ntBASIC0.84□□□□□ -2.27
RFC3P40938 RNU4-55P-201ENST00000410731 137 ntBASIC0.84□□□□□ -2.27
RFC3P40938 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.84□□□□□ -2.27
RFC3P40938 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.84□□□□□ -2.27
RFC3P40938 AC245047.3-201ENST00000429428 127 ntBASIC0.84□□□□□ -2.27
RFC3P40938 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.84□□□□□ -2.27
RFC3P40938 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.84□□□□□ -2.27
RFC3P40938 AC016957.1-201ENST00000534895 309 ntBASIC0.84□□□□□ -2.27
RFC3P40938 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.84□□□□□ -2.27
RFC3P40938 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.84□□□□□ -2.27
RFC3P40938 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.84□□□□□ -2.27
RFC3P40938 FAM157A-202ENST00000615155 405 ntBASIC0.84□□□□□ -2.27
RFC3P40938 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.84□□□□□ -2.27
RFC3P40938 AC073534.2-201ENST00000620377 381 ntBASIC0.84□□□□□ -2.27
RFC3P40938 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
RFC3P40938 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
RFC3P40938 RNU6-1322P-201ENST00000364309 107 ntBASIC0.83□□□□□ -2.28
RFC3P40938 SNORA69-201ENST00000383895 132 ntBASIC0.83□□□□□ -2.28
RFC3P40938 RNU6-505P-201ENST00000384427 107 ntBASIC0.83□□□□□ -2.28
RFC3P40938 MIR514A2-201ENST00000385131 88 ntBASIC0.83□□□□□ -2.28
RFC3P40938 MIR514A3-201ENST00000385132 88 ntBASIC0.83□□□□□ -2.28
RFC3P40938 SNORA12.1-201ENST00000390873 148 ntBASIC0.83□□□□□ -2.28
RFC3P40938 AL034345.1-201ENST00000407768 123 ntBASIC0.83□□□□□ -2.28
RFC3P40938 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
RFC3P40938 RNU6-1332P-201ENST00000516666 104 ntBASIC0.83□□□□□ -2.28
RFC3P40938 RNU6-1198P-201ENST00000516904 67 ntBASIC0.83□□□□□ -2.28
RFC3P40938 RNA5SP454-201ENST00000517231 127 ntBASIC0.83□□□□□ -2.28
RFC3P40938 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.83□□□□□ -2.28
RFC3P40938 AC022432.1-201ENST00000595739 310 ntBASIC0.83□□□□□ -2.28
RFC3P40938 AL162424.1-201ENST00000602325 221 ntBASIC0.83□□□□□ -2.28
RFC3P40938 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
RFC3P40938 U6.73-201ENST00000619194 103 ntBASIC0.83□□□□□ -2.28
RFC3P40938 SNORD50.1-201ENST00000362987 71 ntBASIC0.82□□□□□ -2.28
RFC3P40938 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
RFC3P40938 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
RFC3P40938 Y_RNA.582-201ENST00000391023 95 ntBASIC0.82□□□□□ -2.28
RFC3P40938 MIR1185-2-201ENST00000408687 86 ntBASIC0.82□□□□□ -2.28
RFC3P40938 RNU6-1186P-201ENST00000410429 97 ntBASIC0.82□□□□□ -2.28
RFC3P40938 RNU6-1054P-201ENST00000411293 104 ntBASIC0.82□□□□□ -2.28
RFC3P40938 HSPE1P13-201ENST00000451143 297 ntBASIC0.82□□□□□ -2.28
RFC3P40938 SNORA31.2-201ENST00000516019 134 ntBASIC0.82□□□□□ -2.28
RFC3P40938 SNORA31.4-201ENST00000516049 129 ntBASIC0.82□□□□□ -2.28
RFC3P40938 RNU7-99P-201ENST00000516271 62 ntBASIC0.82□□□□□ -2.28
RFC3P40938 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.82□□□□□ -2.28
RFC3P40938 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.82□□□□□ -2.28
RFC3P40938 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.82□□□□□ -2.28
RFC3P40938 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
RFC3P40938 AC073349.3-201ENST00000617616 186 ntBASIC0.82□□□□□ -2.28
RFC3P40938 SNORD3E-202ENST00000627253 216 ntBASIC0.82□□□□□ -2.28
RFC3P40938 AC121333.1-201ENST00000567488 2709 ntBASIC0.82□□□□□ -2.28
RFC3P40938 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RFC3P40938 AC018630.2-201ENST00000534866 2403 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms