Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
FDFT1P37268 Y_RNA.38-201ENST00000362617 102 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 RNU6-1240P-201ENST00000365155 104 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 RNU6-245P-201ENST00000384020 107 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 MIR517A-201ENST00000385001 87 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 MIR513A1-201ENST00000385138 129 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
FDFT1P37268 MRPL35P3-201ENST00000421557 364 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.12□□□□□ -2.23
FDFT1P37268 TOMM22P2-201ENST00000430735 237 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 AL445305.1-201ENST00000432577 575 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 MTCO3P18-201ENST00000440206 761 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.12□□□□□ -2.23
FDFT1P37268 MTND1P11-201ENST00000456661 876 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 HMGN2P26-201ENST00000463169 339 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 TRBVA-201ENST00000498804 316 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 AC093852.1-201ENST00000503587 266 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 RNU6-1053P-201ENST00000515930 101 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 SNORA25.14-201ENST00000516481 132 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 RNU1-142P-201ENST00000516682 145 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 RNU6-1198P-201ENST00000516904 67 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 RNU6-58P-201ENST00000517143 103 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 AL442163.3-201ENST00000554110 156 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 CYP3A52P-201ENST00000563326 91 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.12□□□□□ -2.23
FDFT1P37268 AC103591.3-201ENST00000608684 209 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 AC040896.1-201ENST00000613819 479 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 AL138726.1-201ENST00000614873 333 ntBASIC1.12□□□□□ -2.23
FDFT1P37268 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
FDFT1P37268 RNA5SP327-201ENST00000362494 101 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 Y_RNA.256-201ENST00000364594 104 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 Y_RNA.319-201ENST00000365138 92 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 RNA5SP259-201ENST00000365541 109 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 Y_RNA.530-201ENST00000384587 101 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 RNU6-332P-201ENST00000391193 108 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 RPL21P1-201ENST00000399532 476 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 RNA5SP504-201ENST00000410676 117 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.11□□□□□ -2.23
FDFT1P37268 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.11□□□□□ -2.23
FDFT1P37268 AC092473.1-201ENST00000441098 221 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 DAP3P1-201ENST00000441522 278 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 RNU6-221P-201ENST00000459541 99 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 ACA59.1-201ENST00000515966 143 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 RNU6-314P-201ENST00000516574 104 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 RNU6-256P-201ENST00000516747 97 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.11□□□□□ -2.23
FDFT1P37268 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.11□□□□□ -2.23
FDFT1P37268 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.11□□□□□ -2.23
FDFT1P37268 AL365434.2-201ENST00000607979 234 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 AC019193.3-201ENST00000609144 554 ntBASIC1.11□□□□□ -2.23
FDFT1P37268 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
FDFT1P37268 RNU6-1123P-201ENST00000362347 106 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 RNU6-451P-201ENST00000362921 107 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 RNY3P3-201ENST00000363816 102 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 SNORD115-8-201ENST00000363856 82 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 SNORD115-32-201ENST00000364079 82 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 SNORD87-201ENST00000364849 89 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 SNORD115-38-201ENST00000365037 82 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 RNU6-541P-201ENST00000384709 110 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 MIR153-2-201ENST00000385225 87 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.1□□□□□ -2.23
FDFT1P37268 AC010154.1-201ENST00000425857 269 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 MTND2P22-201ENST00000444325 1033 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 RNA5SP454-201ENST00000517231 127 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 AC245505.1-201ENST00000556398 224 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 MIR4742-201ENST00000581069 85 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 AL929325.1-201ENST00000603096 117 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 AL359075.3-201ENST00000613288 217 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 MIR8065-201ENST00000620577 100 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 AC009033.1-201ENST00000624279 431 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.1□□□□□ -2.23
FDFT1P37268 MIR1321-201ENST00000637766 79 ntBASIC1.1□□□□□ -2.23
FDFT1P37268 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
FDFT1P37268 RNU6-727P-201ENST00000363592 107 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 RNU6-873P-201ENST00000363833 107 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 RPL30P16-201ENST00000419341 429 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 ZNF885P-201ENST00000420174 1098 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 AL606517.2-201ENST00000442855 241 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 RNU7-66P-201ENST00000459469 62 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 AL133373.1-201ENST00000497098 94 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 AC024909.2-201ENST00000553035 286 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 MIR3672-201ENST00000584290 82 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 AL359821.1-201ENST00000605519 182 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 AC124303.1-201ENST00000605703 360 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.09□□□□□ -2.23
FDFT1P37268 AC099654.5-201ENST00000636479 350 ntBASIC1.09□□□□□ -2.23
FDFT1P37268 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
FDFT1P37268 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
FDFT1P37268 AL391987.6-201ENST00000305671 199 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 Y_RNA.194-201ENST00000363985 102 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 RNU6-1090P-201ENST00000364065 94 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 Y_RNA.517-201ENST00000384551 106 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 RNU6-950P-201ENST00000384651 107 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 RNU6-1186P-201ENST00000410429 97 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.08□□□□□ -2.24
FDFT1P37268 AC005002.2-201ENST00000438228 269 ntBASIC1.08□□□□□ -2.24
FDFT1P37268 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.08□□□□□ -2.24
FDFT1P37268 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.08□□□□□ -2.24
FDFT1P37268 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms