Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CST2P1-201ENST00000425770 87 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 AC010409.1-201ENST00000487382 476 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 SNORA25.14-201ENST00000516481 132 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 Y_RNA.691-201ENST00000516611 103 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM23P36406 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 MIR5701-3-201ENST00000578890 82 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 AC005899.2-201ENST00000584353 90 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 MIR5701-1-201ENST00000585138 82 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 AC069114.2-201ENST00000604699 304 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 uc_338.5-201ENST00000611839 155 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 MIR5701-2-201ENST00000615634 82 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 AL078596.1-201ENST00000624856 447 ntBASIC1.55□□□□□ -2.16
TRIM23P36406 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TRIM23P36406 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM23P36406 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM23P36406 U3.8-201ENST00000363675 217 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 RNU6-1305P-201ENST00000364353 104 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 RNU6-1019P-201ENST00000364424 107 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 MT-TL1-201ENST00000386347 75 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 RNU1-139P-201ENST00000391307 165 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 AL117342.1-201ENST00000404861 406 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 MIR548F5-201ENST00000408421 86 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 RNU6-1050P-201ENST00000410388 107 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 RPL37P10-201ENST00000412884 288 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 AC060773.1-201ENST00000421698 310 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 RPS3AP52-201ENST00000435639 297 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 AC069257.2-201ENST00000441819 155 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.54□□□□□ -2.16
TRIM23P36406 HMGN1P13-201ENST00000505795 138 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 AC025465.3-201ENST00000510570 311 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 AC011406.1-201ENST00000512440 370 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 RNU6-307P-201ENST00000516743 106 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 Y_RNA.706-201ENST00000516933 99 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 Y_RNA.708-201ENST00000516950 96 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 AC005668.1-201ENST00000571142 476 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.54□□□□□ -2.16
TRIM23P36406 MIR8074-201ENST00000615081 81 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 AC022306.2-201ENST00000617563 647 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 snoZ196.1-201ENST00000625269 89 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 AC099654.5-201ENST00000636479 350 ntBASIC1.54□□□□□ -2.16
TRIM23P36406 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.54□□□□□ -2.16
TRIM23P36406 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM23P36406 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
TRIM23P36406 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.16
TRIM23P36406 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
TRIM23P36406 MIR424-201ENST00000362227 98 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 RNU6-112P-201ENST00000363599 104 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 SNORA72.2-201ENST00000365028 127 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 RNU6-793P-201ENST00000384233 104 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 MIR487A-201ENST00000385009 80 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
TRIM23P36406 AP1B1P2-201ENST00000416196 106 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 BTF3P4-201ENST00000418852 495 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 EBAG9P1-201ENST00000418955 543 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 AC008134.1-201ENST00000420943 193 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.53□□□□□ -2.16
TRIM23P36406 RNU7-57P-201ENST00000459540 60 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 RNU6-221P-201ENST00000459541 99 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 AC108729.3-201ENST00000513484 108 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 AC093303.1-201ENST00000514549 295 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 RNU6-1114P-201ENST00000516022 107 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 RNU7-30P-201ENST00000516835 62 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 CYCSP23-201ENST00000519781 313 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 AL645939.4-201ENST00000604495 135 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
TRIM23P36406 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
TRIM23P36406 Y_RNA.160-201ENST00000363677 92 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 RNU6-414P-201ENST00000363705 104 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 RNU6-1059P-201ENST00000363752 98 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 RNU6-873P-201ENST00000363833 107 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 Y_RNA.405-201ENST00000383979 100 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 Y_RNA.451-201ENST00000384200 100 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 RNU6-601P-201ENST00000384540 107 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 Y_RNA.524-201ENST00000384564 100 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 Y_RNA.561-201ENST00000384694 100 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 Y_RNA.594-201ENST00000410373 140 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 RNA5SP504-201ENST00000410676 117 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 MTCYBP10-201ENST00000424905 650 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 AC099677.2-201ENST00000436385 175 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.52□□□□□ -2.17
TRIM23P36406 PRDX4P1-201ENST00000507189 574 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 RNA5SP384-201ENST00000516615 116 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 AC105029.1-201ENST00000520250 669 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 CBX3P8-201ENST00000532412 525 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM23P36406 AL160236.1-201ENST00000556317 195 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 AC016925.2-201ENST00000605108 242 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.52□□□□□ -2.17
TRIM23P36406 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM23P36406 MIR378A-201ENST00000362177 66 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 RNU6-862P-201ENST00000362804 105 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 snoU2-30.2-201ENST00000362805 70 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 RNU6-439P-201ENST00000384188 106 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms