Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PRELID3BP1-201ENST00000457142 540 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXC8P31273 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXC8P31273 AC023442.1-201ENST00000531247 422 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 MIR4287-201ENST00000579398 78 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 RMST_6.1-201ENST00000611980 203 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXC8P31273 MTND5P16-201ENST00000460269 1703 ntBASIC2.17□□□□□ -2.06
HOXC8P31273 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.16□□□□□ -2.06
HOXC8P31273 SNORD115-32-201ENST00000364079 82 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 RNU6-450P-201ENST00000364654 107 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 AC117470.1-201ENST00000381974 330 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 U8.10-201ENST00000384260 133 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 MIR518A2-201ENST00000384966 87 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 MIR153-2-201ENST00000385225 87 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 MIR628-201ENST00000385229 95 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 MIR549A-201ENST00000385268 96 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 Y_RNA.645-201ENST00000391229 102 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 MIR208B-201ENST00000401172 77 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 Y_RNA.592-201ENST00000410274 109 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.16□□□□□ -2.06
HOXC8P31273 U8.22-201ENST00000459141 133 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXC8P31273 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXC8P31273 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXC8P31273 GNAI2P1-201ENST00000541815 315 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 MIR5188-201ENST00000583467 113 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 AC008737.2-201ENST00000599446 118 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 AC104695.3-201ENST00000604052 296 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 AC005034.5-201ENST00000604219 466 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 U2.1-201ENST00000618978 145 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 AL162373.1-201ENST00000620433 407 ntBASIC2.16□□□□□ -2.06
HOXC8P31273 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXC8P31273 RNU6-541P-201ENST00000384709 110 ntBASIC2.15□□□□□ -2.07
HOXC8P31273 RNA5SP213-201ENST00000391031 106 ntBASIC2.15□□□□□ -2.07
HOXC8P31273 AL357139.1-201ENST00000407792 426 ntBASIC2.15□□□□□ -2.07
HOXC8P31273 AC114482.1-201ENST00000418010 247 ntBASIC2.15□□□□□ -2.07
HOXC8P31273 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.15□□□□□ -2.07
HOXC8P31273 AP000870.1-201ENST00000472927 406 ntBASIC2.15□□□□□ -2.07
HOXC8P31273 HMGN1P10-201ENST00000474557 553 ntBASIC2.15□□□□□ -2.07
HOXC8P31273 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXC8P31273 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXC8P31273 UBL5P4-201ENST00000562584 236 ntBASIC2.15□□□□□ -2.07
HOXC8P31273 CYP4A27P-201ENST00000567218 190 ntBASIC2.15□□□□□ -2.07
HOXC8P31273 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXC8P31273 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.15□□□□□ -2.07
HOXC8P31273 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXC8P31273 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
HOXC8P31273 RNU4-15P-201ENST00000362613 141 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 RNU1-17P-201ENST00000363022 152 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 Y_RNA.319-201ENST00000365138 92 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 Y_RNA.389-201ENST00000383924 113 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 Y_RNA.424-201ENST00000384063 103 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 RNU6-708P-201ENST00000384217 107 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 RNU6-378P-201ENST00000384324 107 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 SNORD14D-201ENST00000384390 87 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 Y_RNA.557-201ENST00000384680 107 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 RNU6-1093P-201ENST00000391194 107 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
HOXC8P31273 RNU2-48P-201ENST00000410694 191 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 USP9YP16-201ENST00000430287 407 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 USP9YP23-201ENST00000455085 407 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 AC112492.4-201ENST00000456549 352 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 RNA5SP458-201ENST00000516188 119 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 RNU6-1045P-201ENST00000516321 107 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 AC022868.1-201ENST00000517767 391 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 AC027288.2-201ENST00000553028 243 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 AC090617.3-201ENST00000573670 475 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 VN1R91P-201ENST00000594377 169 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 AP000942.3-201ENST00000603702 160 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 AC137590.2-201ENST00000619709 240 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 AC008555.8-201ENST00000623602 2168 ntBASIC2.14□□□□□ -2.07
HOXC8P31273 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.14□□□□□ -2.07
HOXC8P31273 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC8P31273 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HOXC8P31273 Y_RNA.145-201ENST00000363527 102 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 Y_RNA.459-201ENST00000384251 102 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 RNU6-985P-201ENST00000410182 104 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC8P31273 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXC8P31273 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXC8P31273 RNU6-475P-201ENST00000516073 104 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 RNU6-764P-201ENST00000516396 105 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 RNU6-1046P-201ENST00000516538 107 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 MIR4255-201ENST00000579351 72 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 MIR3683-201ENST00000580847 82 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC8P31273 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 AL138825.1-201ENST00000618587 192 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.13□□□□□ -2.07
HOXC8P31273 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
HOXC8P31273 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC8P31273 ZNF702P-202ENST00000434269 1966 ntBASIC2.12□□□□□ -2.07
HOXC8P31273 SNORD14.1-201ENST00000365609 90 ntBASIC2.12□□□□□ -2.07
HOXC8P31273 RNU6-26P-201ENST00000383985 107 ntBASIC2.12□□□□□ -2.07
HOXC8P31273 Y_RNA.455-201ENST00000384230 98 ntBASIC2.12□□□□□ -2.07
HOXC8P31273 MIR9-3-201ENST00000385084 90 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms