Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MTCO3P15-201ENST00000526563 574 ntBASIC-0.8□□□□□ -2.54
CLIP1P30622 DEFB131D-201ENST00000526803 184 ntBASIC-0.8□□□□□ -2.54
CLIP1P30622 DEFB131C-201ENST00000528817 165 ntBASIC-0.8□□□□□ -2.54
CLIP1P30622 MRPS36P4-201ENST00000534436 298 ntBASIC-0.8□□□□□ -2.54
CLIP1P30622 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.8□□□□□ -2.54
CLIP1P30622 ZNF971P-201ENST00000562068 1249 ntBASIC-0.8□□□□□ -2.54
CLIP1P30622 AC138869.1-201ENST00000568623 124 ntBASIC-0.8□□□□□ -2.54
CLIP1P30622 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.8□□□□□ -2.54
CLIP1P30622 MIR4753-201ENST00000585119 83 ntBASIC-0.8□□□□□ -2.54
CLIP1P30622 AC008752.3-201ENST00000588113 712 ntBASIC-0.8□□□□□ -2.54
CLIP1P30622 SNORA28-201ENST00000606769 126 ntBASIC-0.8□□□□□ -2.54
CLIP1P30622 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.8□□□□□ -2.54
CLIP1P30622 RNU6-527P-201ENST00000363425 104 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 RNU4-84P-201ENST00000364200 139 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 MIR601-201ENST00000385256 79 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 MIR300-201ENST00000401138 83 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 SNORD75.1-201ENST00000408373 60 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 MTND4P24-201ENST00000424002 397 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 USP9YP25-201ENST00000457708 443 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 RNU6-63P-201ENST00000516690 95 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 RNU6-180P-201ENST00000516697 61 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.81□□□□□ -2.54
CLIP1P30622 AL391840.1-201ENST00000571144 367 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 AC012433.1-201ENST00000588916 398 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 AL022154.1-201ENST00000604698 785 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 MIR7107-201ENST00000611489 80 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 AC006504.8-201ENST00000621046 635 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 AC092104.1-201ENST00000497346 1441 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 SNORD114-11-201ENST00000363738 75 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 RNU6-975P-201ENST00000384296 105 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 AC244670.1-201ENST00000436879 112 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.81□□□□□ -2.54
CLIP1P30622 AC100830.2-201ENST00000581636 240 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 AC078795.3-201ENST00000602913 472 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 RPL17P51-201ENST00000605218 238 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 MIR1264-201ENST00000616374 69 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 AC068792.1-201ENST00000621354 417 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 AL391099.1-201ENST00000624635 187 ntBASIC-0.81□□□□□ -2.54
CLIP1P30622 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 RNU4-56P-201ENST00000364700 142 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 RNU6-934P-201ENST00000365154 107 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 AL049545.1-201ENST00000401856 572 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 AL136310.1-201ENST00000404926 654 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 MTND3P20-201ENST00000407663 186 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 MTND3P17-201ENST00000416968 344 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 MTCO3P27-201ENST00000514397 196 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.82□□□□□ -2.54
CLIP1P30622 MIR4771-2-201ENST00000577758 74 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 MIR4771-1-201ENST00000582617 74 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 AL355297.3-201ENST00000604082 446 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 AL158042.1-201ENST00000605338 460 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 AL008636.1-201ENST00000625038 1018 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 AL162726.3-218ENST00000636401 95 ntBASIC-0.82□□□□□ -2.54
CLIP1P30622 RNU6-652P-201ENST00000365488 107 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 MIR520C-201ENST00000385005 87 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 RNU6-613P-201ENST00000410412 108 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.83□□□□□ -2.54
CLIP1P30622 AC010975.2-201ENST00000427781 588 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.83□□□□□ -2.54
CLIP1P30622 RNU6-848P-201ENST00000515948 107 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 RNU6-617P-201ENST00000516147 107 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 RNU6-473P-201ENST00000516164 107 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 RNU6-897P-201ENST00000517135 105 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.83□□□□□ -2.54
CLIP1P30622 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.83□□□□□ -2.54
CLIP1P30622 MIR4432-201ENST00000581823 84 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 MIR4676-201ENST00000583078 72 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 AC008608.1-201ENST00000603910 127 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 AC097478.2-201ENST00000610572 514 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 AC005332.6-201ENST00000613178 446 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.83□□□□□ -2.54
CLIP1P30622 AC104260.1-201ENST00000616660 539 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 AC026585.1-201ENST00000619582 524 ntBASIC-0.83□□□□□ -2.54
CLIP1P30622 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 USP9YP11-201ENST00000427537 717 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 AC133104.1-201ENST00000429100 218 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 AC104563.1-201ENST00000476147 376 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.84□□□□□ -2.54
CLIP1P30622 RNU6-583P-201ENST00000516012 92 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 RNU6-677P-201ENST00000516914 101 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 AC090897.1-201ENST00000580909 226 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 VN1R87P-201ENST00000596706 487 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 Z99289.3-201ENST00000605586 594 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 AC020891.4-201ENST00000605745 93 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 AC103706.2-201ENST00000638080 240 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 AC005592.1-201ENST00000566527 1640 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 CDR1-202ENST00000625883 1485 ntBASIC-0.84□□□□□ -2.54
CLIP1P30622 MIR1185-2-201ENST00000408687 86 ntBASIC-0.85□□□□□ -2.55
CLIP1P30622 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.85□□□□□ -2.55
CLIP1P30622 MTND2P20-201ENST00000440805 661 ntBASIC-0.85□□□□□ -2.55
CLIP1P30622 SUMO1P2-201ENST00000452524 304 ntBASIC-0.85□□□□□ -2.55
CLIP1P30622 AC013470.1-201ENST00000453438 462 ntBASIC-0.85□□□□□ -2.55
CLIP1P30622 RPS29P27-201ENST00000463711 170 ntBASIC-0.85□□□□□ -2.55
CLIP1P30622 AL049829.1-201ENST00000465411 156 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms