Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNFSF4P23510 snoU2-30.2-201ENST00000362805 70 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 Y_RNA.380-201ENST00000365663 111 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 Y_RNA.439-201ENST00000384119 94 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 MIR181A2-201ENST00000384863 110 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 RNU6-823P-201ENST00000391042 103 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 RPEP5-201ENST00000441137 268 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 SUMO1P2-201ENST00000452524 304 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 AC022432.1-201ENST00000595739 310 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 AC104695.3-201ENST00000604052 296 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 AC006435.5-201ENST00000624486 112 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNFSF4P23510 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNFSF4P23510 MTND4P1-201ENST00000457501 1466 ntBASIC2.33□□□□□ -2.04
TNFSF4P23510 AC245060.5-201ENST00000610778 3293 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 RNU6-626P-201ENST00000363354 107 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 RNU6-20P-201ENST00000384106 107 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 MIR515-2-201ENST00000384883 83 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 MIR515-1-201ENST00000384884 83 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 SNORA48.1-201ENST00000390879 135 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TNFSF4P23510 CST2P1-201ENST00000425770 87 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 AC003982.1-202ENST00000469928 248 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 YWHAEP4-201ENST00000505390 198 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 Y_RNA.715-201ENST00000517082 110 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 AP002001.1-203ENST00000534002 267 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFSF4P23510 SCARNA15.3-201ENST00000626315 122 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 SCARNA4.1-201ENST00000628597 123 ntBASIC2.32□□□□□ -2.04
TNFSF4P23510 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TNFSF4P23510 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TNFSF4P23510 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TNFSF4P23510 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.31□□□□□ -2.04
TNFSF4P23510 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.31□□□□□ -2.04
TNFSF4P23510 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TNFSF4P23510 RNU6-859P-201ENST00000362728 107 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 SNORA80A-201ENST00000363922 136 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 SNORA6-201ENST00000384033 151 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 Y_RNA.455-201ENST00000384230 98 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 Y_RNA.462-201ENST00000384268 102 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 AL079342.1-201ENST00000401460 267 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 AL355497.1-201ENST00000406262 551 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 MIR1252-201ENST00000408861 65 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 AC063976.3-201ENST00000426849 329 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.31□□□□□ -2.04
TNFSF4P23510 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.31□□□□□ -2.04
TNFSF4P23510 HMGN2P34-201ENST00000437647 269 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.31□□□□□ -2.04
TNFSF4P23510 AC010598.1-201ENST00000510378 103 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.31□□□□□ -2.04
TNFSF4P23510 MIR4680-201ENST00000580906 66 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 AL162373.1-201ENST00000620433 407 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 AC022513.1-201ENST00000624512 117 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 MIR338-201ENST00000636369 67 ntBASIC2.31□□□□□ -2.04
TNFSF4P23510 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
TNFSF4P23510 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TNFSF4P23510 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
TNFSF4P23510 SNORA16B-201ENST00000364674 135 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 Y_RNA.326-201ENST00000365176 113 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 MIR196B-201ENST00000384852 84 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 AL590004.2-201ENST00000404787 371 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 AL117342.1-201ENST00000404861 406 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 AL590004.1-201ENST00000405321 300 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 RNA5SP501-201ENST00000410990 112 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.3□□□□□ -2.04
TNFSF4P23510 AL390729.2-201ENST00000416137 156 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.3□□□□□ -2.04
TNFSF4P23510 IPO7P1-201ENST00000442031 636 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TNFSF4P23510 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.3□□□□□ -2.04
TNFSF4P23510 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.3□□□□□ -2.04
TNFSF4P23510 AC006380.1-201ENST00000603598 186 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 Y_RNA.812-201ENST00000610788 101 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 Y_RNA.784-201ENST00000613803 101 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 AC040896.1-201ENST00000613819 479 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 AC004467.1-201ENST00000615678 330 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 Y_RNA.787-201ENST00000616522 101 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 Y_RNA.780-201ENST00000617336 101 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 Y_RNA.801-201ENST00000619005 101 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 AC091932.3-201ENST00000624223 323 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.3□□□□□ -2.04
TNFSF4P23510 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.3□□□□□ -2.04
TNFSF4P23510 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
TNFSF4P23510 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
TNFSF4P23510 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TNFSF4P23510 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TNFSF4P23510 RNU6-862P-201ENST00000362804 105 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 RNU1-96P-201ENST00000364163 162 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 RNU6-454P-201ENST00000364292 107 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 AL512604.1-201ENST00000404812 257 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 RNU5A-5P-201ENST00000411054 116 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 RNA5SP184-201ENST00000411071 108 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 AC096920.1-201ENST00000423991 241 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 RPS29P6-201ENST00000438196 145 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 AC005002.2-201ENST00000438228 269 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.29□□□□□ -2.04
TNFSF4P23510 SNORD109B-201ENST00000458961 67 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 SNORD65B-201ENST00000459126 73 ntBASIC2.29□□□□□ -2.04
TNFSF4P23510 SNORD109A-201ENST00000459128 67 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms