Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 Y_RNA.463-201ENST00000384271 102 ntBASIC1.9□□□□□ -2.11
CDH3P22223 Y_RNA.557-201ENST00000384680 107 ntBASIC1.9□□□□□ -2.11
CDH3P22223 MIR29C-201ENST00000385231 88 ntBASIC1.9□□□□□ -2.11
CDH3P22223 AL033519.2-201ENST00000403958 392 ntBASIC1.9□□□□□ -2.11
CDH3P22223 MIR1283-2-201ENST00000408621 87 ntBASIC1.9□□□□□ -2.11
CDH3P22223 RNU6-1156P-201ENST00000410365 100 ntBASIC1.9□□□□□ -2.11
CDH3P22223 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH3P22223 AL445685.2-201ENST00000422551 342 ntBASIC1.9□□□□□ -2.11
CDH3P22223 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
CDH3P22223 BX510359.4-201ENST00000423750 193 ntBASIC1.9□□□□□ -2.11
CDH3P22223 MTND2P29-201ENST00000438595 412 ntBASIC1.9□□□□□ -2.11
CDH3P22223 AC010531.2-201ENST00000465012 153 ntBASIC1.9□□□□□ -2.11
CDH3P22223 AC091179.3-201ENST00000474761 144 ntBASIC1.9□□□□□ -2.11
CDH3P22223 HMGN2P9-201ENST00000476875 229 ntBASIC1.9□□□□□ -2.11
CDH3P22223 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CDH3P22223 RNU6-699P-201ENST00000517081 110 ntBASIC1.9□□□□□ -2.11
CDH3P22223 AC080078.3-201ENST00000605407 463 ntBASIC1.9□□□□□ -2.11
CDH3P22223 AL050343.2-201ENST00000607338 280 ntBASIC1.9□□□□□ -2.11
CDH3P22223 AC008873.1-201ENST00000625051 138 ntBASIC1.9□□□□□ -2.11
CDH3P22223 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
CDH3P22223 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.9□□□□□ -2.11
CDH3P22223 LINC02555-201ENST00000563933 1951 ntBASIC1.89□□□□□ -2.11
CDH3P22223 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH3P22223 RNU1-62P-201ENST00000362599 164 ntBASIC1.89□□□□□ -2.11
CDH3P22223 RNU6-280P-201ENST00000364145 104 ntBASIC1.89□□□□□ -2.11
CDH3P22223 Y_RNA.358-201ENST00000365491 99 ntBASIC1.89□□□□□ -2.11
CDH3P22223 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
CDH3P22223 MIR300-201ENST00000401138 83 ntBASIC1.89□□□□□ -2.11
CDH3P22223 RNU6-1001P-201ENST00000411265 100 ntBASIC1.89□□□□□ -2.11
CDH3P22223 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH3P22223 AC139712.2-201ENST00000424302 339 ntBASIC1.89□□□□□ -2.11
CDH3P22223 MTCO1P44-201ENST00000441935 243 ntBASIC1.89□□□□□ -2.11
CDH3P22223 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH3P22223 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH3P22223 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH3P22223 MIR3124-201ENST00000582636 67 ntBASIC1.89□□□□□ -2.11
CDH3P22223 SNORD11B-201ENST00000607707 90 ntBASIC1.89□□□□□ -2.11
CDH3P22223 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.88□□□□□ -2.11
CDH3P22223 AL356292.1-201ENST00000283110 373 ntBASIC1.88□□□□□ -2.11
CDH3P22223 RNU6-797P-201ENST00000363101 109 ntBASIC1.88□□□□□ -2.11
CDH3P22223 RNY3P11-201ENST00000364153 102 ntBASIC1.88□□□□□ -2.11
CDH3P22223 Y_RNA.496-201ENST00000384444 101 ntBASIC1.88□□□□□ -2.11
CDH3P22223 SNORA8-201ENST00000384574 139 ntBASIC1.88□□□□□ -2.11
CDH3P22223 MIR586-201ENST00000385035 97 ntBASIC1.88□□□□□ -2.11
CDH3P22223 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
CDH3P22223 AC245102.2-201ENST00000448956 180 ntBASIC1.88□□□□□ -2.11
CDH3P22223 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH3P22223 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH3P22223 RNU1-117P-201ENST00000517041 158 ntBASIC1.88□□□□□ -2.11
CDH3P22223 AC093023.1-201ENST00000547375 507 ntBASIC1.88□□□□□ -2.11
CDH3P22223 AK6P2-201ENST00000549020 471 ntBASIC1.88□□□□□ -2.11
CDH3P22223 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.88□□□□□ -2.11
CDH3P22223 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
CDH3P22223 MZT1P2-201ENST00000604387 248 ntBASIC1.88□□□□□ -2.11
CDH3P22223 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH3P22223 AL590240.4-201ENST00000616908 390 ntBASIC1.88□□□□□ -2.11
CDH3P22223 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CDH3P22223 AC073544.1-201ENST00000600110 1595 ntBASIC1.88□□□□□ -2.11
CDH3P22223 AC006026.1-201ENST00000444025 1803 ntBASIC1.87□□□□□ -2.11
CDH3P22223 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH3P22223 RNA5SP361-201ENST00000362686 118 ntBASIC1.87□□□□□ -2.11
CDH3P22223 RNU6-727P-201ENST00000363592 107 ntBASIC1.87□□□□□ -2.11
CDH3P22223 Y_RNA.415-201ENST00000384012 112 ntBASIC1.87□□□□□ -2.11
CDH3P22223 RNU6-793P-201ENST00000384233 104 ntBASIC1.87□□□□□ -2.11
CDH3P22223 RNU6-160P-201ENST00000384591 107 ntBASIC1.87□□□□□ -2.11
CDH3P22223 Y_RNA.535-201ENST00000384612 99 ntBASIC1.87□□□□□ -2.11
CDH3P22223 MIR329-1-201ENST00000385028 80 ntBASIC1.87□□□□□ -2.11
CDH3P22223 MIR625-201ENST00000385047 85 ntBASIC1.87□□□□□ -2.11
CDH3P22223 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CDH3P22223 Y_RNA.592-201ENST00000410274 109 ntBASIC1.87□□□□□ -2.11
CDH3P22223 AC007395.1-201ENST00000451333 677 ntBASIC1.87□□□□□ -2.11
CDH3P22223 AC027575.1-201ENST00000481064 460 ntBASIC1.87□□□□□ -2.11
CDH3P22223 MIR3169-201ENST00000578032 83 ntBASIC1.87□□□□□ -2.11
CDH3P22223 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH3P22223 AC010999.1-201ENST00000611856 324 ntBASIC1.87□□□□□ -2.11
CDH3P22223 AC091925.1-201ENST00000623204 462 ntBASIC1.87□□□□□ -2.11
CDH3P22223 AC138305.3-201ENST00000624988 240 ntBASIC1.87□□□□□ -2.11
CDH3P22223 AC068205.3-201ENST00000636385 468 ntBASIC1.87□□□□□ -2.11
CDH3P22223 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH3P22223 ZNF355P-201ENST00000427301 3216 ntBASIC1.87□□□□□ -2.11
CDH3P22223 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH3P22223 Y_RNA.5-201ENST00000362334 102 ntBASIC1.86□□□□□ -2.11
CDH3P22223 RNU1-58P-201ENST00000362413 163 ntBASIC1.86□□□□□ -2.11
CDH3P22223 Y_RNA.179-201ENST00000363844 90 ntBASIC1.86□□□□□ -2.11
CDH3P22223 RNA5SP493-201ENST00000364115 91 ntBASIC1.86□□□□□ -2.11
CDH3P22223 RNU6-1305P-201ENST00000364353 104 ntBASIC1.86□□□□□ -2.11
CDH3P22223 SNORD87-201ENST00000364849 89 ntBASIC1.86□□□□□ -2.11
CDH3P22223 RNU6-418P-201ENST00000384035 107 ntBASIC1.86□□□□□ -2.11
CDH3P22223 RNU6-975P-201ENST00000384296 105 ntBASIC1.86□□□□□ -2.11
CDH3P22223 MIR597-201ENST00000384968 97 ntBASIC1.86□□□□□ -2.11
CDH3P22223 SNORA69.1-201ENST00000390904 137 ntBASIC1.86□□□□□ -2.11
CDH3P22223 RNA5SP212-201ENST00000391223 107 ntBASIC1.86□□□□□ -2.11
CDH3P22223 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CDH3P22223 AC016717.1-201ENST00000448918 286 ntBASIC1.86□□□□□ -2.11
CDH3P22223 CHEK2P4-201ENST00000450340 246 ntBASIC1.86□□□□□ -2.11
CDH3P22223 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH3P22223 RNU6-295P-201ENST00000516901 104 ntBASIC1.86□□□□□ -2.11
CDH3P22223 AC022868.1-201ENST00000517767 391 ntBASIC1.86□□□□□ -2.11
CDH3P22223 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH3P22223 MIR4753-201ENST00000585119 83 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms