Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-451P-201ENST00000362921 107 ntBASIC1.38□□□□□ -2.19
HLA-DPA1P20036 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DPA1P20036 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DPA1P20036 AC010154.1-201ENST00000425857 269 ntBASIC1.38□□□□□ -2.19
HLA-DPA1P20036 AL445305.1-201ENST00000432577 575 ntBASIC1.38□□□□□ -2.19
HLA-DPA1P20036 AL606517.2-201ENST00000442855 241 ntBASIC1.38□□□□□ -2.19
HLA-DPA1P20036 AC108729.3-201ENST00000513484 108 ntBASIC1.38□□□□□ -2.19
HLA-DPA1P20036 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
HLA-DPA1P20036 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DPA1P20036 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DPA1P20036 AL512310.8-201ENST00000550183 120 ntBASIC1.38□□□□□ -2.19
HLA-DPA1P20036 AC103591.3-201ENST00000608684 209 ntBASIC1.38□□□□□ -2.19
HLA-DPA1P20036 AC009033.1-201ENST00000624279 431 ntBASIC1.38□□□□□ -2.19
HLA-DPA1P20036 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HLA-DPA1P20036 RNU6-873P-201ENST00000363833 107 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DPA1P20036 RPS27P1-201ENST00000450552 247 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 RNU7-66P-201ENST00000459469 62 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 RPL31P58-201ENST00000469001 379 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 FO393415.2-201ENST00000480085 343 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 AL163540.1-201ENST00000485382 386 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 RNU6-314P-201ENST00000516574 104 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 AC024909.2-201ENST00000553035 286 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DPA1P20036 TPRKBP2-201ENST00000565969 475 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 MIR3672-201ENST00000584290 82 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 AC124303.1-201ENST00000605703 360 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 AL355802.3-201ENST00000607571 545 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DPA1P20036 MIR8065-201ENST00000620577 100 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DPA1P20036 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DPA1P20036 U6.108-201ENST00000637764 58 ntBASIC1.37□□□□□ -2.19
HLA-DPA1P20036 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.36□□□□□ -2.19
HLA-DPA1P20036 MTND4P12-201ENST00000498999 1377 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 RNA5SP327-201ENST00000362494 101 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 RNU6-727P-201ENST00000363592 107 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 U3.8-201ENST00000363675 217 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 RNU6-137P-201ENST00000363680 108 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.36□□□□□ -2.19
HLA-DPA1P20036 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 MIR1185-2-201ENST00000408687 86 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 RNU6-1186P-201ENST00000410429 97 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 RPL23AP36-201ENST00000413895 458 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 RPL30P16-201ENST00000419341 429 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 RNU6-506P-201ENST00000516553 94 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 SUMO2P16-201ENST00000519475 264 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 AC027288.2-201ENST00000553028 243 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 AC245505.1-201ENST00000556398 224 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 MIR4498-201ENST00000577599 66 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 7SK.7-201ENST00000603504 247 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 MZT1P2-201ENST00000604387 248 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 AC016727.1-205ENST00000605437 569 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 AC021506.2-201ENST00000612354 169 ntBASIC1.36□□□□□ -2.19
HLA-DPA1P20036 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.100-201ENST00000363141 102 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.414-201ENST00000384011 101 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 RNU6-1031P-201ENST00000384773 107 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 RN7SKP200-201ENST00000410564 320 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 AC005002.2-201ENST00000438228 269 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 NDUFB4P10-201ENST00000452541 359 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DPA1P20036 MTCYBP18-201ENST00000501056 747 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 SNORA31.10-201ENST00000516482 106 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 AL137100.2-201ENST00000555786 315 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 AC008269.2-201ENST00000561915 1105 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 AC022217.4-201ENST00000604389 163 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.35□□□□□ -2.19
HLA-DPA1P20036 RNU6-1266P-201ENST00000362794 105 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.135-201ENST00000363439 95 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.194-201ENST00000363985 102 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 RNU6-280P-201ENST00000364145 104 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.212-201ENST00000364177 102 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 Y_RNA.517-201ENST00000384551 106 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HLA-DPA1P20036 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.34□□□□□ -2.19
HLA-DPA1P20036 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 RPL30P10-201ENST00000488148 337 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 RN7SKP88-201ENST00000516847 250 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DPA1P20036 AP003033.1-201ENST00000527244 415 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 7SK.8-201ENST00000612110 250 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 7SK.11-201ENST00000615477 250 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 AC009248.2-201ENST00000619826 254 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 MIR8054-201ENST00000620877 86 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 7SK.13-201ENST00000622040 250 ntBASIC1.34□□□□□ -2.19
HLA-DPA1P20036 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.34□□□□□ -2.19
HLA-DPA1P20036 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
HLA-DPA1P20036 RNU5F-3P-201ENST00000363767 117 ntBASIC1.33□□□□□ -2.2
HLA-DPA1P20036 SNORD116-11-201ENST00000383882 92 ntBASIC1.33□□□□□ -2.2
HLA-DPA1P20036 Y_RNA.415-201ENST00000384012 112 ntBASIC1.33□□□□□ -2.2
HLA-DPA1P20036 RNU6-793P-201ENST00000384233 104 ntBASIC1.33□□□□□ -2.2
HLA-DPA1P20036 RNU6-17P-201ENST00000384245 107 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms